Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  133 bits (335), Expect = 2e-35
 Identities = 98/357 (27%), Positives = 166/357 (46%), Gaps = 28/357 (7%)

Query: 320 TLTQQISG-TLLVLAILAVWFGLRRWI---------------GRALNNITRHLAQLTQHK 363
           T+T+Q++  + ++L I  V  G+  +I                 +LN+I +    LT+  
Sbjct: 191 TVTEQMADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSLNDIAKGEGDLTK-- 248

Query: 364 LNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAEQSNQSLA 423
              RL + G  +   +    N  +      +  V      +   A   H   +  +  L 
Sbjct: 249 ---RLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQTKVMSSQLL 305

Query: 424 AQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALET 483
           + N     +   I ++ ++  E+A  +      +  A    A   + ++ + + +  L +
Sbjct: 306 SHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDASLEEIAGLMS 365

Query: 484 TLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGRGFAVVADE 543
            +     ++  L+++   I  ++ +I GIA+ TNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 366 QINNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 425

Query: 544 VRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKSTFMQIERA 603
           VR LAS T   T  I +M++EL    S + + +DES++  V ++ SS  +  +   +  A
Sbjct: 426 VRNLASRTQASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAISESLGSVTSA 485

Query: 604 VAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQVAEIA 660
           V  I     QI  A  EQ   T ++N+ V  I E   E       +L S+E  A+++
Sbjct: 486 VTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNE-------LLHSSEDAAKVS 535