Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 673 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  180 bits (457), Expect = 2e-49
 Identities = 165/677 (24%), Positives = 300/677 (44%), Gaps = 24/677 (3%)

Query: 10  TQTLGAVFLCITILMISLSVTSLRGIERVGAQFNQLSEQALPFALNNAALTQNFLEQVKY 69
           T+ +G  F  +T+L++ L  TS      +      + E +LP       LT+   EQ + 
Sbjct: 7   TRVIGG-FSVVTLLLVLLGFTSYLTNISLKDSSAMMQELSLPALKATNHLTETLSEQQRQ 65

Query: 70  LGYGTRSQSEQELNQVLNEWQKLDAQAGDEITRLQQNVQLLSSAEAVQQAEQLQREILHF 129
           +     +     +  +   +     Q  +EI+ L Q VQ  ++  A+    QL      F
Sbjct: 66  VLIAYHAPKSSNIPDIRKVFNDHGTQFKNEISNLTQLVQGQANLSAL--ISQLDGSFSTF 123

Query: 130 QQLAQSILKLQQLQLSKTAQISEQAKQFRYGLSSIGPEMGRIASFLAVDNPEAMDAANRF 189
           ++ + ++L  ++  LSK  Q+    K+           +  I       NP+A   A   
Sbjct: 124 ERDSLAMLTEREAALSKQEQLIGLKKKLENAADDASSVLLDIIDLENSQNPDAQSIA--- 180

Query: 190 TASASAMESAF-------LLLFIEEEMSAAQKYRQELKNRVAGLELAFDDFKEWYPEIKD 242
            ASASA++++          L   EEMS  +   +EL   ++  +   +       +I D
Sbjct: 181 -ASASAIDTSMGNIITTIADLVTNEEMSKHELISKELDYILSETKNKLEYVNRHAQDIID 239

Query: 243 YASLTAPYE------MVLAGFQAQAVIEQIINKLEDAQQQNKDFASAAEVAQQLVTQLNQ 296
             +L +  E       +L G  +  +++    +L  A+      A+  +  + +   +  
Sbjct: 240 ADTLKSVNEDTKKVLALLEGPDSMVLLKA--TQLNHAKSAMNQLATIEKDVKVIDRNMED 297

Query: 297 WSTLAQQHIVQGKQEVTSTISAVTLTQQISGTLLVLAILAVWFGLRRWIGRALNNITRHL 356
            S   +       QE  + I A ++   I   + ++A + + F +   + R+L  +   L
Sbjct: 298 VSNNIESVAANMSQETIAKIDAASIRTIIVVLIAIVAAVIISFAVVAPLKRSLYQVNNAL 357

Query: 357 AQLTQHKLNHRLDLVGPQDFQNVAAQLNQVIVSTHESLALVTRNCETLYQTAELSHGSAE 416
             L    L H+LD  G  +F  +A   N+++ S    +  +      L   AE +     
Sbjct: 358 NVLASGNLTHKLDDSGHDEFAELAKNCNRLVDSLRGLIVGILDRSNQLAAAAEQTSAITA 417

Query: 417 QSNQSLAAQNQALLTMAATINQLDASIREIAGVSHDSYTDSVEAAEHSAQGVKVI-EQNQ 475
           Q+   +  Q   +  +A    +L +S ++++ +S D     ++ A+  A+ ++ I E+N+
Sbjct: 418 QTTSGIQEQKSQVDQVATATTELSSSAQQVS-MSADDALAQIKQADQEAKHMRTIAEENK 476

Query: 476 QRLQALETTLAVNDAAMSELNQRVTSIREMVDMISGIADSTNLLALNAAIEAARAGEQGR 535
           + + AL   +A     ++++     SI  ++D+I GIA+ TNLLALNAAIEAARAGEQGR
Sbjct: 477 RTILALADEVAKAGQVINKVQSDSASIGSILDVIRGIAEQTNLLALNAAIEAARAGEQGR 536

Query: 536 GFAVVADEVRKLASDTSKQTTNIRDMMNELVTAASKSRQAVDESRKEMVTALQSSEEVKS 595
           GFAVVADEVR LAS T   T  I+ M+  L   A ++  A+D  R +    +  +E+   
Sbjct: 537 GFAVVADEVRSLASRTQVSTREIQQMIEVLQQGAQQAVAAMDMGRAQANACVDKTEQANL 596

Query: 596 TFMQIERAVAHIRTRVEQITQATEEQKRATADVNKAVAQISEQGQETKRQLDAMLESAEQ 655
               I ++V         I  A +EQ   +  V++ +  I+   +ET    D   +S+ Q
Sbjct: 597 ALETISQSVHKAYDAGTHIAHAAQEQNVVSQQVSEKLEHIAAISEETAIGADQTAQSSHQ 656

Query: 656 VAEIAGHQQAMLHKYEL 672
           VA++A   QA + ++ +
Sbjct: 657 VAKLAEELQASVGEFRV 673