Pairwise Alignments

Query, 673 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  147 bits (371), Expect = 1e-39
 Identities = 129/507 (25%), Positives = 241/507 (47%), Gaps = 52/507 (10%)

Query: 181 EAMDAANRFTASASAMESAFLLLFIEEEMSAAQKYRQEL-----KNRVAGLELAFDDFKE 235
           +  + + RF  + SA+ +A   L+ + ++S     R EL     K+ +   +   D  ++
Sbjct: 37  QMQEFSQRFNPAISAILNADRDLY-QAQLSEEVLLRPELSSENRKSEIDNWQENVDQARD 95

Query: 236 WYPEIKDYASLTAPYEMVLAGFQAQAVI-----EQIINKLEDAQQQNKDFASAAEVAQQL 290
              E K+Y           +GF+AQ  +      ++IN ++     N DF    E+A+QL
Sbjct: 96  RMGEFKNYLQDHLEVIKSTSGFEAQFSLWYQASSEVINAVK-----NNDF----ELARQL 146

Query: 291 VTQLNQWSTLAQQHIVQGKQEVT----------STISAVTLTQ---QISGTLLVLAILAV 337
               ++    A + I     E            ++  A T TQ    I+  + ++A++  
Sbjct: 147 HENKSKKEFKALRSIYNAAGEAADNRVKELDLQASEQATTQTQISVTIATLVAIVALVIA 206

Query: 338 WFGLR------RWIGRALNNITRHLAQLTQHKLNHRLDLVGP--QDFQNVAAQLNQVIVS 389
           +FG +      R I   +N+I      LTQ     R D +G     F    AQL Q++++
Sbjct: 207 YFGPKIIVNAIRDITDRINDIVDGDGNLTQRIPITRQDEIGELANAFNLFVAQLQQMVIA 266

Query: 390 THESLALVTRNCETLYQTAELSHGSAEQSNQSLAAQNQALLTMAATINQLDASIREIAGV 449
                  V++  E L   +  + G + +       Q Q + T+   +N++ A++RE+A  
Sbjct: 267 IISQTKDVSQTVENLATKSTTTIGISYE-------QEQFVDTIVTAVNEMSAAVREVASN 319

Query: 450 SHDSYTDSVEAAEHSAQGVKVIEQNQQRLQALETTLAVNDAAMSELNQRVTSIREMVDMI 509
           +  + T+  +  + + +G  ++ Q+   +Q L  ++    A + +L+    +I  ++D+I
Sbjct: 320 ALHTATEITKVNDQTIEGKNILTQSVNHIQQLSESVKQAVAVIEKLSVNSANIASVLDVI 379

Query: 510 SGIADSTNLLALNAAIEAARAGEQGRGFAVVADEVRKLASDTSKQTTNIRDMMNELVTAA 569
             IA+ TNLLALNAAIEAARAGEQGRGFAVVADEVR LAS T   T +I+ M+ EL    
Sbjct: 380 RSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTETSTQDIQRMIEELQRGV 439

Query: 570 SKSRQAVDESRKEMVTALQSSEEVKSTFMQIERAVAHIRTRVEQITQATEEQKRATADVN 629
           + + ++++       + +  + + +    +I  + + +     Q   ATEEQ   T ++N
Sbjct: 440 NDAVKSIESGASLTNSTVTLASQTQDALDEILNSTSKVSEMSTQTATATEEQTHVTEEIN 499

Query: 630 KAVAQISEQGQETKRQLDAMLESAEQV 656
           + + ++S++     R  + +++  +Q+
Sbjct: 500 RNLTELSDK----TRYCNTVIQETQQI 522