Pairwise Alignments

Query, 245 a.a., DTW domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 251 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  214 bits (545), Expect = 1e-60
 Identities = 105/221 (47%), Positives = 149/221 (67%), Gaps = 2/221 (0%)

Query: 4   HAFHHLYQYRLERSTKPFLARGGKIKRCLYCLVELTHCLCAHQPDIESQVAVLLIVSENE 63
           HA H LY+YR   STKPF ARG K+ RC  CL+    C C+ +  + +Q + LLI+  +E
Sbjct: 6   HAVHRLYEYRKSISTKPFGARGKKLIRCPLCLLGEQFCTCSLRKQLTTQASFLLIMYNDE 65

Query: 64  VFKPSNTGRLIADTVKETYVYQWSRTEPNPEMLALLSNPAYYPVLIFPAETEEDKTRVLS 123
           V KP+N+GRLIAD + +T+ + WSRT+P PE+LALLS+  Y P L+FPA+  +    VLS
Sbjct: 66  VLKPTNSGRLIADLIPDTHAFLWSRTDPAPELLALLSSDHYQPFLVFPAQYADQGQTVLS 125

Query: 124 PIP--TEFAGKKPLLVLIDGSWREAKRIFRKSPYLASLPLVSVEPERLSQYIMRKSENEQ 181
            +P  T   GK+PLL+++DGSWREA ++FRKSPYL  LP++S +P+ L+ Y +RK  ++ 
Sbjct: 126 QVPMATLAKGKRPLLIMLDGSWREAIKMFRKSPYLQGLPILSFDPDTLATYALRKGSHDF 185

Query: 182 HLATAEVASLVLDMFGDRHSASTLSLWFEAFKETYLTCKSR 222
            L TAEVASL L   G+  +   L+ WF+ F E+ L  ++R
Sbjct: 186 QLGTAEVASLALAAMGEEANGKALTAWFDLFVESSLLGRNR 226