Pairwise Alignments

Query, 302 a.a., N-acetylglucosamine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 306 a.a., ROK family protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  187 bits (474), Expect = 3e-52
 Identities = 113/304 (37%), Positives = 161/304 (52%), Gaps = 13/304 (4%)

Query: 4   GFDVGGTKIEFGAFNEQLERVATERVATPTDDYAKLVETIAGLVHKYDAQFGVEGTVGLG 63
           G D+GGTKIE  A N +   V  +R+ TP D Y   +  I  LV++ ++  G +G+VG+G
Sbjct: 5   GIDLGGTKIELVALNNEGNEVVRKRINTPRD-YQGTLNAIVDLVNEAESTLGEKGSVGVG 63

Query: 64  IPGMEDADNGCVLTVNVPAAKGKPLRADLETKLGRAVKVENDANCFALSEAWDDELKEAA 123
           IPG+    +G V   N     G PL   L   LGR V+V NDANCFALSEA D      +
Sbjct: 64  IPGVISPYSGLVKNANSTWINGHPLDVHLGELLGREVRVANDANCFALSEAVDGAAAGKS 123

Query: 124 SVMGLILGTGFGGGLVYEGKVFSGRNHVAGEIGHMRLPIDAWFHLGEKAPLLGCGCGNKG 183
            V G+I+GTG G G+   GKV +G N + GE GH  LP   W    E+     C CGN  
Sbjct: 124 VVFGVIIGTGCGAGVAINGKVHAGGNGIGGEWGHNPLP---WM-TKEEFNTTRCFCGNPD 179

Query: 184 CMDNYLSGRGFELLYEHYYGE--------KKKAIDIITAQKEGESKAVEHVERFMELLAI 235
           C++ ++SG GF   Y               K   +I++    G+  A+   ER+++ LA 
Sbjct: 180 CIETFISGTGFVRDYNEALSRAASVQRVPAKSGSEIMSLVDGGDEIALAAFERYVDRLAR 239

Query: 236 CFANIFTANDPHVVVLGGGLSNYDLIYEEMPKRVPKHLLSVAKCPKIVKAKHGDSGGVRG 295
             A++    DP  +VLGGG+SN + IY  +P  +  +++       +V+  +G S GVRG
Sbjct: 240 SLAHVINLLDPDAIVLGGGMSNVEAIYPRLPALLSHYVVGRECRTPVVQNLYGCSSGVRG 299

Query: 296 AAFL 299
           AA+L
Sbjct: 300 AAWL 303