Pairwise Alignments

Query, 302 a.a., N-acetylglucosamine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., NagC family transcriptional regulator from Bifidobacterium breve UCC2003

 Score = 81.6 bits (200), Expect = 2e-20
 Identities = 78/305 (25%), Positives = 129/305 (42%), Gaps = 26/305 (8%)

Query: 4   GFDVGGTKIEFGAFNEQLERVATERVATPTDDYAKLVETIAGLVHKYDAQFGVEGTVGLG 63
           G DVGGTKIE    +     + + R+     + A + + ++        +F     +G+G
Sbjct: 12  GVDVGGTKIEAALVDATGAVLNSARIPARHGNAAVVEDIVSVARQAAGTRFDEVSAIGIG 71

Query: 64  IPGMEDADNGCVLTVNVPAAKGKPLRADLETKLGRAVKVENDANCFALSEA----WDDEL 119
            PG  D+  G V  +         +  ++    G  V VEND N  A+  A      D L
Sbjct: 72  TPGTVDSATGHVGNIVNLDVVSLDMGPEVSRLAGVPVHVENDVNAAAVGAAVLLGGADGL 131

Query: 120 KEAASVMGLILGTGFGGGLVYEGKVFSGRNHVAGEIGHMRLPIDAWFHLGEKAPLLGCGC 179
               ++  L  GTG   G+V  G +  G +  AGEIGH  +P++           L C C
Sbjct: 132 D--GTIAFLNFGTGLAAGIVQNGVLLHGYSGAAGEIGH--IPVE--------PHRLKCPC 179

Query: 180 GNKGCMDNYLSGRGFELLYEHYYGEKKKAIDIITAQKEGESKAVEHVERFMELLAICFAN 239
           G  GC++   SG     L+ +         D+I      E+KAV+ ++  +  +      
Sbjct: 180 GQYGCLETVCSGAAVGRLWPN---ADPPMPDLIRCASRREAKAVDVLDMVVRAIGDTIQI 236

Query: 240 IFTANDPHVVVLGGGLSN-----YDLIYEEMPKRVP--KHLLSVAKCPKIVKAKHGDSGG 292
           +  + DP ++VLGGG++       ++I  E+ +R    + L S+    ++  A  G   G
Sbjct: 237 LAQSVDPRLIVLGGGMAKTGEPLVEVITAELRRRESQCRFLESLDLPARLRLAPAGQPVG 296

Query: 293 VRGAA 297
             GAA
Sbjct: 297 AIGAA 301