Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 277 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score = 92.0 bits (227), Expect = 1e-23
 Identities = 75/231 (32%), Positives = 121/231 (52%), Gaps = 18/231 (7%)

Query: 1   MTIKLTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLL--EPSN 58
           M   +  Q L+  F  +       ++I P + + L G +G GK+TLL+ LAGL   + SN
Sbjct: 1   MNEAIHVQGLNKTFSHKSALIDLALSIQPGEMVALIGASGSGKSTLLRHLAGLACCDRSN 60

Query: 59  G---RVLGRKPWWQRLFLTSAT---SEVVYLHQSPYLFDD-TVYQNVVYGI-----RFSG 106
           G   +VLGR+        +      +++ Y+ Q   L +  +V  NV+ G      R+ G
Sbjct: 61  GGQVQVLGREVQSSGRLNSQVRRLRADIGYIFQQFNLVNRLSVLDNVLLGCLGRMPRWRG 120

Query: 107 LSA---HEKRAQVITALRMVGLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPS 163
             A   +E++ + + AL  VGL  LA +  S LSGG++QRVA+ARA   +  ++L DEP 
Sbjct: 121 SLALFNNEEKQRAMVALERVGLADLAAQRASTLSGGQQQRVAIARALTQRAEVILADEPI 180

Query: 164 ASLDQESIERLVIMARDLLER-GSSLVITSHQTNALTALCKKQWWIKERQL 213
           ASLD ES  R++ +  D+  R G ++V+T HQ +     C +   +K  ++
Sbjct: 181 ASLDPESARRVMEILADINRRDGKTVVVTLHQVDYAVRYCPRAVALKSGRI 231