Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 388 a.a., Spermidine/putrescine ABC transporter ATP-binding subunit (NCBI) from Rhodospirillum rubrum S1H

 Score = 92.8 bits (229), Expect = 9e-24
 Identities = 68/206 (33%), Positives = 112/206 (54%), Gaps = 23/206 (11%)

Query: 35  LKGDNGVGKTTLLKILAGLLEPSNGRVL--GRK----PWWQRLFLTSATSEVVYLHQSPY 88
           L G +G GKTTLL+++AG  +P++GR+L  GR     P + R       S  ++ H S  
Sbjct: 61  LLGGSGCGKTTLLRMMAGFEQPTSGRILIDGRDMTGVPPYDRPVNMMFQSYALFPHMS-- 118

Query: 89  LFDDTVYQNVVYGIRFSGLSAHEKRAQVITALRMVGLETLADEHISVLSGGEKQRVAMAR 148
                V QN+ +G++  G+   E+ A+V   L +V LE  A      LSGG++QRVA+AR
Sbjct: 119 -----VEQNIAFGLKQDGMPKAEREARVAEMLSLVQLERFAKRKPHQLSGGQRQRVALAR 173

Query: 149 AWILKPSILLMDEPSASLDQESIERLVIMARDLLER-GSSLVITSH-QTNALT-----AL 201
           +    P +LL+DEP ++LD++  ER  +   ++ E+ G + V+ +H Q  A+T     A+
Sbjct: 174 SLAKHPRVLLLDEPLSALDKKLRERTQLDLVNIQEKTGITFVVVTHDQEEAMTMADRVAI 233

Query: 202 CKKQWWIK---ERQLIESPLLQIVKE 224
             + W ++    + + E P  + V E
Sbjct: 234 MDEGWIVQIDAPQSMYEYPNTRFVAE 259