Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 605 a.a., ATP-binding cassette domain-containing protein from Rhodopseudomonas palustris CGA009

 Score = 92.4 bits (228), Expect = 2e-23
 Identities = 71/201 (35%), Positives = 99/201 (49%), Gaps = 20/201 (9%)

Query: 8   QQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVLGRKPW 67
           + +++ F    LF   E+A+   D + L G NG GK+TLLKI+AGL+EP  G        
Sbjct: 9   KDIALTFGGAALFDGVELAVSAGDRLCLIGRNGSGKSTLLKIVAGLIEPDRG-------- 60

Query: 68  WQRLFLTSATSEVVYLHQSPYLFDDTVYQNVVYGIRFSGLSAHEKRAQVITALRMVGLET 127
             R     AT  V YL Q P        Q  V     +GL+  +   Q    L  +GL  
Sbjct: 61  -SRFVQPGAT--VRYLPQEPDFDGFATTQAYVE----AGLAPGDDHYQAAYLLEQLGLH- 112

Query: 128 LADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDLLERGSS 187
             DE+ + LSGGE +R A+AR     P ILL+DEP+  LD  +IE L     DL +R  +
Sbjct: 113 -GDENPAHLSGGEARRAALARILAPDPDILLLDEPTNHLDLTTIEWL---ENDLAQRRCA 168

Query: 188 LVITSHQTNALTALCKKQWWI 208
           +V+ SH    L+ L +   W+
Sbjct: 169 IVMISHDRRFLSNLSRATAWL 189



 Score = 64.7 bits (156), Expect = 4e-15
 Identities = 55/196 (28%), Positives = 92/196 (46%), Gaps = 16/196 (8%)

Query: 5   LTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVLGR 64
           + A+ +S  + DR +     I I   D + + G NG GKTTL+ +L G L P +G V   
Sbjct: 283 IEAKSISKAWGDRPIVDAFSIRINRGDRVGIVGPNGAGKTTLISLLTGALAPDSGTV--- 339

Query: 65  KPWWQRLFLTSATSEVVYLHQSPYLFD-DTVYQNVVYGIRFSGLSAHEKRAQVITALR-M 122
                RL       E+  L QS    D  +   + + G R   +    K   VI  ++  
Sbjct: 340 -----RL---GTNLEIATLDQSRDSLDPKSTLSDALTGGRGDQVMVGGKPRHVIGYMKDF 391

Query: 123 VGLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDLL 182
           +  +  A   +  LSGGE+ R+ +AR+     ++L++DEP+  LD E+++ L  M  D  
Sbjct: 392 LFTQEQARTPLEALSGGERGRLMLARSLANPSNLLVLDEPTNDLDLETLDVLEEMLGDY- 450

Query: 183 ERGSSLVITSHQTNAL 198
               ++++ SH  + L
Sbjct: 451 --DGTVILISHDRDFL 464