Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 342 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 64/193 (33%), Positives = 109/193 (56%), Gaps = 6/193 (3%)

Query: 5   LTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVL-- 62
           LT +Q+   ++ + +    ++ +   +   L G +G GKTTLLK +AGL   S GR+   
Sbjct: 4   LTIEQVHSDYQGQTILRGLDLVLHQGEIAALLGPSGCGKTTLLKAIAGLQPISQGRISIN 63

Query: 63  GRKPWWQRLFLTSATSEVVYLHQSPYLFDD-TVYQNVVYGIRFSGLSAHEKRAQVITALR 121
           GR       F+ S   EV  + Q   LF   TV +N+++G++  GL    ++A++   L 
Sbjct: 64  GRLLSGPETFVPSERREVGMIFQDYALFPHLTVAENILFGVK--GLDKAARQARLGEMLA 121

Query: 122 MVGLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMARDL 181
           +V LE L   +   LSGG++QRV++ARA   +P +LL+DEP +++D +    +++  R++
Sbjct: 122 LVKLEGLGGRYPHELSGGQQQRVSIARALAYEPELLLLDEPFSNIDAKVRGEMMVEIREI 181

Query: 182 L-ERGSSLVITSH 193
           L +RG S V  +H
Sbjct: 182 LKQRGVSAVFVTH 194