Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  183 bits (464), Expect = 3e-51
 Identities = 93/215 (43%), Positives = 141/215 (65%), Gaps = 8/215 (3%)

Query: 4   KLTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRV-- 61
           KL A+ L M F  R+LF    + +   + IYL+GDNG GK+TL+KILAGL  PS G++  
Sbjct: 5   KLIARDLEMSFGSRLLFKAQRLELCQGNVIYLQGDNGTGKSTLMKILAGLQLPSKGKIEI 64

Query: 62  --LGRKPWWQRLFLTSATSEVVYLHQSPYLFDDTVYQNVVYGIRFSGLSAHEKRAQVITA 119
               + PWW R        + +YLHQ PYLFD TV  N+ YG+ F+      KR ++  A
Sbjct: 65  NGFKKDPWWTR---NPLLGKAIYLHQHPYLFDGTVNYNLTYGLHFAASKIEAKR-RIGQA 120

Query: 120 LRMVGLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMAR 179
           + M  L +L     S LSGGE+QR+A+ARAWIL+P +L++DEP++++D++S   ++ M  
Sbjct: 121 IEMAQLGSLLQARASDLSGGERQRLAIARAWILQPKLLMLDEPTSNMDKDSQALVLQMIL 180

Query: 180 DLLERGSSLVITSHQTNALTALCKKQWWIKERQLI 214
            L ++G+ ++++SHQ  ALTA+C++QW I+E+Q+I
Sbjct: 181 QLKQQGAGMLLSSHQNCALTAICEQQWHIEEQQVI 215