Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 381 a.a., spermidine/putrescine transport ATP-binding protein potA from Caulobacter crescentus NA1000

 Score = 93.2 bits (230), Expect = 7e-24
 Identities = 64/207 (30%), Positives = 103/207 (49%), Gaps = 14/207 (6%)

Query: 5   LTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRVL-- 62
           +T + ++ RF          + +   +   L G +G GKTTLL++LAG   P+ GR+L  
Sbjct: 15  ITFENVTKRFGKLAAVDNVSLTVNEGEFFALLGPSGCGKTTLLRMLAGFETPTEGRILID 74

Query: 63  ----GRKPWWQRLFLTSATSEVVYLHQSPYLFDDTVYQNVVYGIRFSGLSAHEKRAQVIT 118
                  P  +R       S  V+ H        TV  NV YG++   +   E+ A+V  
Sbjct: 75  GQDISNVPPNKRPVNMVFQSYAVFPHM-------TVADNVAYGLKVDNVPKAEREARVAE 127

Query: 119 ALRMVGLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMA 178
           AL +V L  L       LSGG++QRVA+ARA + +P +LL+DEP ++LD +  E++    
Sbjct: 128 ALELVQLGGLGGRKPDQLSGGQRQRVALARALVKRPRVLLLDEPLSALDAKLREQMRTEL 187

Query: 179 RDLLER-GSSLVITSHQTNALTALCKK 204
             L E+ G + ++ +H  +   AL  +
Sbjct: 188 CTLQEKVGITFIMVTHDQDEALALASR 214