Pairwise Alignments

Query, 240 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3

 Score =  180 bits (457), Expect = 2e-50
 Identities = 93/217 (42%), Positives = 142/217 (65%), Gaps = 8/217 (3%)

Query: 4   KLTAQQLSMRFKDRVLFHIPEIAIGPNDAIYLKGDNGVGKTTLLKILAGLLEPSNGRV-- 61
           KL A+ L M F  R+LF    + +   + IYL+GDNG GK+TL+KILAGL  PS G++  
Sbjct: 5   KLIARDLEMSFGPRLLFKAHSLELCQGNVIYLQGDNGSGKSTLMKILAGLQPPSKGKIEV 64

Query: 62  --LGRKPWWQRLFLTSATSEVVYLHQSPYLFDDTVYQNVVYGIRFSGLSAHEKRAQVITA 119
               +  WW R        + VYLHQ PYLFD TV  N+ YG+ F+      KR ++  A
Sbjct: 65  SGFKKDAWWTR---NPLLGKAVYLHQHPYLFDGTVNYNLTYGLPFAASKTEAKR-RIGQA 120

Query: 120 LRMVGLETLADEHISVLSGGEKQRVAMARAWILKPSILLMDEPSASLDQESIERLVIMAR 179
           + M  L +L     S LSGGE+QR+A+ARAWIL+P +L++DEP++++D++S   ++ M +
Sbjct: 121 IEMAQLGSLLQARASNLSGGERQRLAIARAWILQPKLLMLDEPTSNMDKDSQALVLQMIQ 180

Query: 180 DLLERGSSLVITSHQTNALTALCKKQWWIKERQLIES 216
            L ++G+ ++++SHQ  ALTA+C++QW I+++Q+I S
Sbjct: 181 QLKQQGTGMLLSSHQNCALTAICEQQWHIEDQQVITS 217