Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 290 a.a., Binding-protein-dependent transport systems inner membrane component from Pseudomonas syringae pv. syringae B728a

 Score = 65.1 bits (157), Expect = 1e-15
 Identities = 48/206 (23%), Positives = 96/206 (46%), Gaps = 7/206 (3%)

Query: 17  LDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTLLSLINTLQAVPTVVI 76
           L+P     + ++    L ++ L L+  V  ++ ++  +FRGK  L++LI+   +V  V+ 
Sbjct: 62  LEPDALSALKLTVIAVLISVPLNLVFGVSAAWCVSKYSFRGKSILVTLIDLPFSVSPVIA 121

Query: 77  GLLLYMLLSRAGPLGDW------QMLFTQQAMILGQALICFPILVAMMHGALQSTDRRSL 130
           GL+  ++    G  G W      Q++F    ++L    +  P +   +   +Q    +  
Sbjct: 122 GLVYVLMFGAQGLFGPWLQDHDIQIVFALPGIVLATIFVTVPFVARELIPLMQEQGTQEE 181

Query: 131 ETSMTLGASVPRLF-ATLVWEARFPLMAATIAGFSRIVTEVGCSMMVGGNIMGLTRNIPT 189
           E +  LGA+  ++F    V   ++ L+   +   +R + E G   +V G+I G+T  +P 
Sbjct: 182 EAARLLGANGWQMFWHVTVPNIKWGLIYGVVLCTARAMGEFGAVSVVSGHIRGVTNTLPL 241

Query: 190 AISLESNKGAFAQGVALGMVLLALAL 215
            + +  N+       A+  +LL LAL
Sbjct: 242 HVEILYNEYNHVAAFAVASLLLILAL 267