Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., ABC transporter, permease protein (RefSeq) from Shewanella amazonensis SB2B

 Score =  263 bits (673), Expect = 2e-75
 Identities = 137/231 (59%), Positives = 175/231 (75%)

Query: 2   SLWQTTLDALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTL 61
           S ++    AL LL SLD  LW I+ VSF VSL A+ + LIPS++L FVLA+  F G+  +
Sbjct: 4   SWFELIQQALGLLFSLDKDLWSIIWVSFGVSLAALLITLIPSMLLGFVLAFKQFPGRHFV 63

Query: 62  LSLINTLQAVPTVVIGLLLYMLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHGA 121
           L+L+ TLQ++PTVVIGLL+Y+LL+R GPLGD + LFTQQ MILGQ LIC P+L+AM   A
Sbjct: 64  LNLVQTLQSIPTVVIGLLVYLLLTRMGPLGDLRWLFTQQGMILGQMLICAPVLIAMSQAA 123

Query: 122 LQSTDRRSLETSMTLGASVPRLFATLVWEARFPLMAATIAGFSRIVTEVGCSMMVGGNIM 181
             S D+R+ ET++TLGAS+PR    +  E R PL+ A IA FSRIVTEVGCSMMVGGNI 
Sbjct: 124 FTSADKRAWETALTLGASLPRAILMVSGELRGPLLLAVIAAFSRIVTEVGCSMMVGGNIE 183

Query: 182 GLTRNIPTAISLESNKGAFAQGVALGMVLLALALGLNFLLSSLRGKGYLRT 232
            +TRNIPTAI+LE++KG FAQ +ALG+VLL LA+ +NF L +LRGK  +R+
Sbjct: 184 YVTRNIPTAIALETSKGDFAQAIALGLVLLFLAIIMNFALGNLRGKNQVRS 234