Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 235 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Shewanella loihica PV-4

 Score =  263 bits (672), Expect = 2e-75
 Identities = 134/223 (60%), Positives = 171/223 (76%)

Query: 10  ALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTLLSLINTLQ 69
           AL LL SLDP +W IV+VSFSVSL A+A+ LIPS++L FVLA+  F G+W   +L+ T Q
Sbjct: 12  ALSLLFSLDPDVWSIVSVSFSVSLAALAITLIPSMILGFVLAFARFPGRWFATNLVQTTQ 71

Query: 70  AVPTVVIGLLLYMLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHGALQSTDRRS 129
           ++PTVVIGLL+Y++L+R GPLGD + LFTQ+ MILGQ +IC P+L+AM   A  S D+R+
Sbjct: 72  SIPTVVIGLLVYLMLTRMGPLGDLKWLFTQKGMILGQMMICAPVLIAMSQAAFTSVDKRA 131

Query: 130 LETSMTLGASVPRLFATLVWEARFPLMAATIAGFSRIVTEVGCSMMVGGNIMGLTRNIPT 189
            ETS TLGAS  R    +  E + PL+ A +A FSRI+TEVGCSMMVGGNI G+TRNIPT
Sbjct: 132 WETSRTLGASWLRSVWLVCRELKVPLLMAIVAAFSRILTEVGCSMMVGGNIAGVTRNIPT 191

Query: 190 AISLESNKGAFAQGVALGMVLLALALGLNFLLSSLRGKGYLRT 232
           AI+LE++KG FAQ +ALG+VLL LAL LNF L +LRG+   R+
Sbjct: 192 AIALETSKGDFAQAIALGLVLLILALVLNFTLGTLRGRAEPRS 234