Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., molybdate ABC transporter, inner membrane subunit (RefSeq) from Shewanella loihica PV-4

 Score = 68.9 bits (167), Expect = 8e-17
 Identities = 61/211 (28%), Positives = 94/211 (44%), Gaps = 18/211 (8%)

Query: 22  WEIVAVSFSVSLTAIALVLIPSVVLSF-VLAYTNFRGKWTLLSLINTLQAVPTVVIGLLL 80
           W+ + +S  +S   + LVLIP  + +   LAY  FRGK  L +LI     +P  VIG  L
Sbjct: 3   WQALLLSIKLSCVTV-LVLIPFAIWAGRFLAYRQFRGKSWLEALIMVPLVLPPTVIGYYL 61

Query: 81  YMLLSRAGPLGDW-------QMLFTQQAMILGQALICFPILVAMMHGALQSTDRRSLETS 133
            + L     LG         Q++F    +++   L+  P  +  +  A +S      +  
Sbjct: 62  LVGLGSQSWLGQTLEALLGQQLVFHFSGLVVASVLVNIPFAIQPIQRAFESVPEEVRDAG 121

Query: 134 MTLGASVPRLF----ATLVWEARFPLMAATIAGFSRIVTEVGCSMMVGGNIMGLTRNIPT 189
              G S  ++       LVW     ++ A +  FS ++ E G  +M+GGNI G T+ I  
Sbjct: 122 ACCGMSPAKVLFKIELPLVWPG---VLTALVLCFSHVLGEFGVVLMMGGNIAGETKTI-- 176

Query: 190 AISLESNKGAFAQGVALGMVLLALALGLNFL 220
           AIS+  +  AF    A  M LL L   +  L
Sbjct: 177 AISIYDSVQAFDFAAAGQMSLLLLLFAITAL 207