Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 293 a.a., sulfate ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 68.2 bits (165), Expect = 2e-16
 Identities = 53/214 (24%), Positives = 99/214 (46%), Gaps = 7/214 (3%)

Query: 19  PKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTLLSLINTLQAVPTVVIGL 78
           P++     +SF+ S     +  +   ++++VL    F GK  + +L++   A+PT V G+
Sbjct: 73  PQVVASYKLSFAASFIGATINAVFGTLVAWVLVRYQFLGKKVVDALVDLPFALPTAVAGI 132

Query: 79  LLYMLLSRAGPLGDWQML------FTQQAMILGQALICFPILVAMMHGALQSTDRRSLET 132
            L  L S  G +G +  L      +++  +++    I  P +V  +   L    +   E 
Sbjct: 133 ALVTLYSTTGWVGQYLYLWGIKVAYSEIGVVIALTYIGLPFVVRTVQPVLADFSKELEEA 192

Query: 133 SMTLGASVPRLFATLVWEARFP-LMAATIAGFSRIVTEVGCSMMVGGNIMGLTRNIPTAI 191
           S +LGAS       ++  A  P L+      F+R V E G  + + GN+   T   P  I
Sbjct: 193 SASLGASRFTTIKRVILPAVLPALLTGYALAFARAVGEYGSVIFISGNLPYRTEITPLLI 252

Query: 192 SLESNKGAFAQGVALGMVLLALALGLNFLLSSLR 225
             ++ +  +    A+G+V+LA A  L  +++SL+
Sbjct: 253 VSKAEQYDYNGAAAIGVVMLAAAFILLLIINSLQ 286