Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 226 a.a., molybdenum ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 70.9 bits (172), Expect = 2e-17
 Identities = 62/211 (29%), Positives = 102/211 (48%), Gaps = 14/211 (6%)

Query: 26  AVSFSVSLTAIA-LVLIP-SVVLSFVLAYTNFRGKWTLLSLINTLQAVPTVVIGLLLYML 83
           A+  SV L++I  LVL+P S++    LAY  F GK  + +LI     +P  VIG  L + 
Sbjct: 5   ALWLSVKLSSITVLVLVPLSILAGRALAYRQFIGKSWVEALIMVPLVLPPTVIGYYLLVG 64

Query: 84  LSRAGPLGDW-------QMLFTQQAMILGQALICFPILVAMMHGALQSTDRRSLETSMTL 136
           L     LG W       Q++F    ++L   L+  P  +  +  A ++      + +   
Sbjct: 65  LGSQSWLGQWLERLTGQQLVFHFSGLVLASVLVNIPFALQPIQRAFEAVPHDVRDAAACC 124

Query: 137 GASVPRLFATLVWEARFP-LMAATIAGFSRIVTEVGCSMMVGGNIMGLTRNIPTAISLES 195
           G S  ++   +     +P ++ A +  FS ++ E G  +M+GGNI G T+ I  +IS+  
Sbjct: 125 GMSKLKILLKIELPMVWPGVLTAIVLCFSHVLGEFGVVLMMGGNIAGETKTI--SISIYD 182

Query: 196 NKGAFAQGVA--LGMVLLALALGLNFLLSSL 224
           +  AF  G A  + +VLL  A+    L +SL
Sbjct: 183 SVQAFDFGAAGTMSLVLLLFAITALALTTSL 213