Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., molybdenum ABC transporter, permease protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 83.6 bits (205), Expect = 3e-21
 Identities = 62/211 (29%), Positives = 106/211 (50%), Gaps = 13/211 (6%)

Query: 18  DPKLWEIVAVSFSVSLTAIALVLIPSVVL----SFVLAYTNFRGKWTLLSLINTLQAVPT 73
           +P L E  A +  +SL    L +I S+ L    +++LA   F GK    S+++    +P 
Sbjct: 14  EPLLSEYEAAALLLSLKVSTLAVIASLPLGILCAWLLARVEFPGKAIFDSILHLPLVLPP 73

Query: 74  VVIGLLLYMLLSRAGPLGDW-------QMLFTQQAMILGQALICFPILVAMMHGALQSTD 126
           VV+G LL + + R G +G W          F+ +   L  A++ FP++V  +  + ++ D
Sbjct: 74  VVVGYLLLISMGRQGIIGQWLYNWFGLSFSFSWRGAALAAAVVSFPLMVRAIRQSFETVD 133

Query: 127 RRSLETSMTLGASVPRLFATLVWEARFP-LMAATIAGFSRIVTEVGCSMMVGGNIMGLTR 185
            R  + + TLG+S  R+F T+      P +++  I  F+R + E G ++    NI G TR
Sbjct: 134 IRLEQAARTLGSSRWRVFLTITLPLTSPGIVSGMIIAFARSLGEFGSTITFVSNIPGETR 193

Query: 186 NIPTAI-SLESNKGAFAQGVALGMVLLALAL 215
            IP A+ S     GA  Q + L ++ + +AL
Sbjct: 194 TIPLAMYSFIETPGAEYQAMRLCVISIVIAL 224