Pairwise Alignments

Query, 232 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

Subject, 228 a.a., binding-protein-dependent transport systems inner membrane component (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  151 bits (382), Expect = 9e-42
 Identities = 83/217 (38%), Positives = 128/217 (58%)

Query: 9   DALHLLVSLDPKLWEIVAVSFSVSLTAIALVLIPSVVLSFVLAYTNFRGKWTLLSLINTL 68
           DA+ L++  DP L EI+ +S  V+LTA+A+  +  + L        F G+  L+ L+N  
Sbjct: 3   DAIGLVLVWDPDLVEIIGLSLRVTLTAVAVACVIGLPLGAAAGAFRFPGRTVLVVLLNAA 62

Query: 69  QAVPTVVIGLLLYMLLSRAGPLGDWQMLFTQQAMILGQALICFPILVAMMHGALQSTDRR 128
             +P VV+GLL+Y++LS AGPLG   +L+T  AMI+ QA++  PI+ A+    +   D  
Sbjct: 63  MGLPPVVVGLLVYLMLSAAGPLGTLGLLYTPTAMIIAQAVLVTPIVAALTCQVVADLDAE 122

Query: 129 SLETSMTLGASVPRLFATLVWEARFPLMAATIAGFSRIVTEVGCSMMVGGNIMGLTRNIP 188
             E   +L           +W+AR+ L+   +AGF R V EVG  M+VGGNI   TR + 
Sbjct: 123 YSEQFASLQVGPVDRIGAYLWDARYTLLTVALAGFGRAVAEVGAVMIVGGNIDHATRVMT 182

Query: 189 TAISLESNKGAFAQGVALGMVLLALALGLNFLLSSLR 225
           T I+LE++KG     +ALG++LL +A+ +N L+ S+R
Sbjct: 183 TTIALETSKGNLELALALGIILLCMAVIVNALVMSIR 219