Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 463 a.a., C4-dicarboxylate transport transcriptional regulatory protein from Pseudomonas fluorescens FW300-N2E2

 Score =  260 bits (664), Expect = 8e-74
 Identities = 154/379 (40%), Positives = 222/379 (58%), Gaps = 23/379 (6%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLAS----SIEEAEVLRGEHHYD---LLILDINLP 70
           V+L+DD+  ++  L + L       DLA      + EA+ + G+   D   +++ DI +P
Sbjct: 9   VVLIDDDPHLRQALSQTL-------DLAGLKILPLAEAKGVAGQLPRDWPGVVVSDIRMP 61

Query: 71  GRSGIEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRC 130
           G  G+E        D    V+ +TG  D+  A+ A++ GA DF+ KPF  + +L +V+R 
Sbjct: 62  GMDGLELLNELHAQDAELPVLLITGHGDVPLAVQAMRAGAYDFLEKPFASDHLLDSVRRA 121

Query: 131 MNKRL----NERLQYALQRDFQRH-CTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGES 185
           +  R     N  L+ AL     RH  + +++G S     L+++I   A +RA VLI GE+
Sbjct: 122 LALRRLVLDNRSLRLALS---DRHELSARLVGQSTPMLRLREQIGALAATRADVLILGET 178

Query: 186 GTGKELVARGIHEASGRQ-GPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRV 244
           G GKE+VAR +H+ S R+ GPFV IN GA+A  ++ESELFGH  GAFTGA+K R G F  
Sbjct: 179 GAGKEVVARALHDLSSRRNGPFVAINAGALAESVVESELFGHEPGAFTGAQKRRIGKFEF 238

Query: 245 ANGGTLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVEN 304
           ANGGTLFLDEI  M L +Q  LLR+L++R V  +G   ++ +D+RV+AAT  +L+Q  + 
Sbjct: 239 ANGGTLFLDEIESMSLDVQVKLLRLLQERVVERLGGNHQIPLDIRVIAATKEDLRQAADQ 298

Query: 305 GRFRGDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQD 364
           GRFR DLYYRLNV  + + PLRER +D   L   F     A  G+P  +      + +  
Sbjct: 299 GRFRADLYYRLNVAPLRIPPLRERGEDTLMLFQHFADEASARHGLPPHELQPAQRALLLR 358

Query: 365 YDWPGNIRELKNLIERCLL 383
           + WPGN+REL+N  ER  L
Sbjct: 359 HSWPGNVRELQNAAERFAL 377