Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 476 a.a., chemotaxis protein CheY from Azospirillum brasilense Sp245

 Score =  377 bits (969), Expect = e-109
 Identities = 210/467 (44%), Positives = 298/467 (63%), Gaps = 8/467 (1%)

Query: 17  SVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIE 76
           S+L+VDDE G+   L +AL +   RV++A S EE        H +++ILD+ LPGRSG++
Sbjct: 8   SILVVDDEEGICSFLSRALERRGWRVEVAGSAEEGARTLERIHAEVIILDVALPGRSGLD 67

Query: 77  WEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLN 136
           W +      +  +VI +T FAD++TAI AL+ GA+DF+LKPF +EQ+L ++ RC+ +   
Sbjct: 68  WLKELMAGGYAGEVILVTAFADMDTAIDALRSGAADFVLKPFRVEQILNSIDRCVERTRL 127

Query: 137 ERLQYALQRDFQR--HCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVAR 194
            R  Y L+R   +  +   +I+G S     L+  + + AP+ ++VLI+GESG GKELVAR
Sbjct: 128 TRENYVLRRQLSKKDNGRDEIVGRSDAMMRLRSLVQRVAPTPSTVLIQGESGVGKELVAR 187

Query: 195 GIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLD 253
            +H+ S R   PFV +NC AI+ +L+E+ELFGH  GAFTGAK +R+GLF  A+GGTLFLD
Sbjct: 188 ALHDLSPRADRPFVAVNCAAISADLIEAELFGHARGAFTGAKDARKGLFYYAHGGTLFLD 247

Query: 254 EIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYY 313
           EIGE+ LT+Q+ LLRVLE+R +RPVGSE+EV VDVRVV ATNR+L+ E   GRFR DL+Y
Sbjct: 248 EIGELSLTLQSKLLRVLEERRIRPVGSEQEVPVDVRVVTATNRDLKAEAAAGRFRPDLFY 307

Query: 314 RLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRE 373
           RL V+ + + PLR+R  D+ EL   F + L   L +P      E   ++  + WPGN+RE
Sbjct: 308 RLEVMTLTIPPLRQRAVDVPELAALFMRFLPVRLAVPPLTLTPEVTRALMCHSWPGNVRE 367

Query: 374 LKNLIERCLLLGKPPAHYWRELNGLPI----YAEPEVTMSQSNNSEISLGDNVTQPSLGY 429
           L+N +ER LLLG+ P       N   +     A+P +  +    +       V    +  
Sbjct: 368 LRNFVERSLLLGEFPLDDLDTANAAAVEAGLAADPSLCAAAVAGNPPCAPCPVRHVRMDG 427

Query: 430 PND-WPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEW 475
            +D  PL+ VEK HI  ++A  +G+K+ AA  LGV+RKTL+RK  EW
Sbjct: 428 DSDVLPLAEVEKRHILTVLARCDGSKTRAADLLGVSRKTLDRKCVEW 474