Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 445 a.a., sigma-54-dependent Fis family transcriptional regulator from Pedobacter sp. GW460-11-11-14-LB5

 Score =  261 bits (668), Expect = 3e-74
 Identities = 159/465 (34%), Positives = 257/465 (55%), Gaps = 26/465 (5%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIEW 77
           VL++DDE  +  +L + +     +   A++ +E   L   +   ++I D+ LP  +G+  
Sbjct: 5   VLIIDDEKKICSLLSRIIELEGFKTLQANTGKEGLKLLKNNDVSIVISDVKLPDVNGVAL 64

Query: 78  EEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNK-RLN 136
            +         ++I +T +  +   + A+K GA D+++K  + ++++  + + M+K  L 
Sbjct: 65  VKDIKAIKSYVEIINLTAYGTIADGVLAIKNGAFDYLVKGDDNDKIIPLLYKAMDKSNLQ 124

Query: 137 ERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVARGI 196
            R+     +  ++H    IIG S           + + +  +VL+ GE+GTGKE+ A+ I
Sbjct: 125 RRVSDLENKIAKKHSFQTIIGQSKSLMEAIDLAKKVSATDTTVLLLGETGTGKEVFAQSI 184

Query: 197 HEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLDEI 255
           H  S R   PFV +NC   +P+LLESELFG+ +GAFTGA K ++GL   ANGGTL LDEI
Sbjct: 185 HYESPRAAKPFVALNCSGFSPDLLESELFGYKAGAFTGANKDKKGLLEEANGGTLLLDEI 244

Query: 256 GEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYYRL 315
           GEM L +QA LLRVLE +    VG  +   V+VR++AATN++L+ +  +G+FR DLYYRL
Sbjct: 245 GEMNLDLQAKLLRVLESQTFIKVGDTQTQQVNVRILAATNKDLKADAASGKFRSDLYYRL 304

Query: 316 NVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRELK 375
           +V  I + PLRERK D+  L  ++ K    ++    PK   + +S + D+ W GNIRELK
Sbjct: 305 SVFTITLPPLRERKADIPALAKYYLKEFADKVNRSTPKMDDKILSLLSDHSWKGNIRELK 364

Query: 376 NLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPNDWPL 435
           N+IER ++L         + + L + A P      +                   ND+ L
Sbjct: 365 NVIERLVILS--------DGDTLSVTALPPEFFEFA----------------PIENDYNL 400

Query: 436 SAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEWESEDL 480
             +EK HIQ+++   +GNK+  +R LG+   TL RK +E++  ++
Sbjct: 401 QQIEKQHIQKVLIHTKGNKTETSRLLGIGLTTLYRKIEEYQIREI 445