Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  271 bits (692), Expect = 4e-77
 Identities = 167/464 (35%), Positives = 253/464 (54%), Gaps = 31/464 (6%)

Query: 15  AFSVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSG 74
           +  VLLV+D+  ++L  ++AL      V    S E+A          +++ DI LPG  G
Sbjct: 6   SLQVLLVEDDPDVRLGCEQALQLEDIPVSSVDSAEKARRRLTRDFPGIVVSDIRLPGMDG 65

Query: 75  IEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKR 134
           +   +     D    V+ +TG  D+  A+ A+K GA DFI KPF+ + +++ V+R ++KR
Sbjct: 66  MALLKELQAIDPELPVVLITGHGDVSLAVQAMKGGAHDFIEKPFSPDYLVEVVRRALDKR 125

Query: 135 --LNERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELV 192
               E  Q   + + +     ++IG S     ++Q +     S A +LI GE+GTGKEL 
Sbjct: 126 RLTLEVRQLRARLESRDTLEARLIGRSPAMVKVRQLVADLGNSAADILIFGETGTGKELA 185

Query: 193 ARGIHEASGRQ-GPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLF 251
           AR +HEA  R+ G FV INCG +   L ESE+FGH +GA+TGA K R G    A+GGTLF
Sbjct: 186 ARCLHEAGPRRNGNFVAINCGGLPETLFESEIFGHEAGAYTGAAKKRIGKIEHASGGTLF 245

Query: 252 LDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDL 311
           LDEI  MP+ MQ  LLRVL++R++  +GS   + VD RV+AAT  +L++  + GRFR DL
Sbjct: 246 LDEIESMPMAMQIKLLRVLQERSLERLGSNTPIPVDCRVIAATKADLKELSDQGRFRADL 305

Query: 312 YYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNI 371
           YYRLNV  + + PLRER++D+  L   F     A    P+P      +  +  YDWPGN+
Sbjct: 306 YYRLNVATLPLPPLRERREDIPLLFEHFLLQAAARHERPVPAADPARMGPLLAYDWPGNV 365

Query: 372 RELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPN 431
           REL+N+ +RC+L             G+     P    ++S   + SL + V         
Sbjct: 366 RELRNVADRCVL-------------GIEAGVAP--FTAESPTQKRSLAETV--------- 401

Query: 432 DWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERKYKEW 475
                + E+A I + +  ++G+ +  A DL +A+ TL  K +++
Sbjct: 402 ----DSFERALITEALERNQGSLARTAEDLRIAKTTLHDKIRKY 441