Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 448 a.a., response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains from Dechlorosoma suillum PS

 Score =  276 bits (705), Expect = 1e-78
 Identities = 169/462 (36%), Positives = 245/462 (53%), Gaps = 37/462 (8%)

Query: 15  AFSVLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSG 74
           A  V LV+D+  +++   +AL+     V   +  E A           ++ D+ LPGR G
Sbjct: 6   ALPVFLVEDDPAVRMGSAQALTLAGLEVRSFADAEGALAALAAELPGAVVSDVRLPGRDG 65

Query: 75  IEWEEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKR 134
           I         D    VI +TG  D+  A+ A++ GA DFI KPF  E +++  ++ + KR
Sbjct: 66  IALLGELRQLDRELPVILVTGHGDVAMAVQAMRDGAHDFIEKPFTSEHLVRVTRQALEKR 125

Query: 135 L----NERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKE 190
                N RL+ AL           +IG +   + +++ +   AP+   +LI GE+G+GKE
Sbjct: 126 ALLLENRRLKEALPTQDG----LPVIGQTPAMQEVRRLVAALAPTDVDILINGETGSGKE 181

Query: 191 LVARGIHEASGRQGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTL 250
           +VAR IH ASGR+GPFV INC A+   + ESE+FGH +GAFTGA K R G    A+GGTL
Sbjct: 182 VVARAIHSASGRRGPFVAINCAALPESVFESEMFGHEAGAFTGAGKRRIGKIEYAHGGTL 241

Query: 251 FLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGD 310
           FLDEI  MPL +Q  LLR L++R++  +G    V VD RVVAA+  +L+   E G+FR D
Sbjct: 242 FLDEIESMPLNLQVKLLRALQERSIERLGGNAPVAVDCRVVAASKADLKALSEAGQFRAD 301

Query: 311 LYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGN 370
           LYYRLNV+ I++ PLR R++D+  L+  F +      G  +P W   +++  Q   WPGN
Sbjct: 302 LYYRLNVVSIDLPPLRRRQEDIPLLMGHFLQQAAKRFGREVPAWGPAELARWQAQPWPGN 361

Query: 371 IRELKNLIER-CLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGY 429
           +RELKN  ER CL L +P A         P  + P   +  +   E++            
Sbjct: 362 VRELKNAAERFCLGLDQPQA-------ASPAGSAPGAELPLARRLELA------------ 402

Query: 430 PNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERK 471
                    E+  I+  +A   GN + AA  L + +KTL  K
Sbjct: 403 ---------EQGFIEAALAACHGNVALAAERLQLPKKTLYDK 435