Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 443 a.a., transcriptional regulatory protein ZraR from Klebsiella michiganensis M5al

 Score =  282 bits (721), Expect = 2e-80
 Identities = 180/460 (39%), Positives = 257/460 (55%), Gaps = 33/460 (7%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIEW 77
           +L+VDD++    +L+  L  W  RV LA++  +A     E  +DL++ DI +    GIE 
Sbjct: 8   ILVVDDDISHCTILQALLRGWGYRVALANNGLQALEKVREKVFDLVLCDIRMAEMDGIET 67

Query: 78  EEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCM-NKRLN 136
            +     +    V+ MT ++ ++TA+ ALK GA D+++KP + +++   +   + + RL+
Sbjct: 68  LKEIKTFNPSIPVLIMTAYSSVDTAVEALKSGALDYLIKPLDFDKLQLTLSEALAHTRLS 127

Query: 137 ERLQYALQRDFQRHCTTQIIGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVARGI 196
           E                 ++G S     L   I   APS A+VLI GESGTGKELVAR +
Sbjct: 128 ESPVTETPA-----AQFGMVGDSPAMRALLNNITLVAPSDATVLIHGESGTGKELVARAL 182

Query: 197 HEASGR-QGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLDEI 255
           H +S R + P V +NC A+   LLESELFGH  GAFTGA K REG F  A+GGTLFLDEI
Sbjct: 183 HASSARSRRPLVILNCAALNESLLESELFGHEKGAFTGADKRREGRFVEADGGTLFLDEI 242

Query: 256 GEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYYRL 315
           G++   MQ  LLR +++R V+ VGS + ++VDVR++AAT+R+L +EV  GRFR DLYYRL
Sbjct: 243 GDISPLMQVRLLRAIQEREVQRVGSNQTLSVDVRLIAATHRDLAEEVSAGRFRQDLYYRL 302

Query: 316 NVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRELK 375
           NV+ I++ PLR R++D+  L  +F +         +  +  + +  +  Y WPGNIREL+
Sbjct: 303 NVVTIDMPPLRHRREDIPPLARYFLQRYAERNRKAVQGFTPQAMDLLIHYAWPGNIRELE 362

Query: 376 NLIERCLLLGKPPAHYWREL----NGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPN 431
           N +ER ++L        REL     G P+   P              GD+  Q       
Sbjct: 363 NAVERAVVLLTGEYISERELPLAITGTPVADAPH-------------GDDSIQ------- 402

Query: 432 DWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERK 471
             PL  VEK  I   +    GNK+ AAR LG+ RKTL  K
Sbjct: 403 --PLVEVEKEAILAALERTGGNKTEAARRLGITRKTLLAK 440