Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 458 a.a., ATPase AAA from Burkholderia phytofirmans PsJN

 Score =  264 bits (675), Expect = 4e-75
 Identities = 178/470 (37%), Positives = 256/470 (54%), Gaps = 38/470 (8%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLL----------ILDI 67
           +L+VDD+ G +  L + L      VDL  S+EEA    GE    +L           LD 
Sbjct: 4   ILVVDDDDGFREGLVETL------VDLGHSVEEAS--SGEQALGILTNAAVPFTCMFLDF 55

Query: 68  NLPGRSGIEWEEAFTDPDH--RADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQ 125
            LPG  G+   EA     H     V+ +TGFA  +  I A+ LGA D + KP   + +  
Sbjct: 56  RLPGMDGLAILEALQTTVHGPTLPVVMLTGFASSDNTIGAMTLGAFDHLTKPVGRQAIQS 115

Query: 126 AVQRCMNKRL-NERLQYALQRDFQRHCTTQ--IIGSSVQTELLKQRIVQFAPSRASVLIE 182
            ++R ++           L +      +T+  ++G S     ++++I + A S A+VL+ 
Sbjct: 116 LLERIVSSTAAGATSDEPLPKFAAEPASTKPRLLGVSETLREVQKQIGRAASSDATVLLS 175

Query: 183 GESGTGKELVARGIHEASGRQG-PFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGL 241
           GE+GTGKE+ A  +H+AS R+  PFV +NC AI  ELLESELFGH  GAFTGA   R G 
Sbjct: 176 GETGTGKEVAAHVLHDASKRRDKPFVAVNCAAIPSELLESELFGHVKGAFTGASADRAGC 235

Query: 242 FRVANGGTLFLDEIGEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQE 301
           F  A+GGTL LDE+G+MPL MQA LLRV+++R + P+GS + + VD+R+VAAT+R+L+  
Sbjct: 236 FAAADGGTLLLDEVGDMPLPMQAKLLRVIQERQITPLGSSRVIPVDIRLVAATHRDLKAM 295

Query: 302 VENGRFRGDLYYRLNVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISS 361
           VE G FR DL YRLN++ IE+ PLRER  D+  L   F   +       M + +      
Sbjct: 296 VEAGEFREDLLYRLNIIPIELPPLRERLADILPLAEHFLAEVAIRRSRGM-RLSSPAQRL 354

Query: 362 MQDYDWPGNIRELKNLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDN 421
           +  Y WPGN+REL+N IER   L   P+    +L  L          ++ N+ +  L  +
Sbjct: 355 LLGYAWPGNVRELRNAIERAGALAPGPSITAEDLGFL---------NAKPNDGQPLLNAS 405

Query: 422 VTQPSLGYPNDWPLSAVEKAHIQQIVALHEGNKSAAARDLGVARKTLERK 471
               SL       + AVE+A I   + L + N++ AAR LG++R+TL  K
Sbjct: 406 FFDMSL----PGAVEAVERAMISHALRLADNNRADAARRLGISRQTLYAK 451