Pairwise Alignments

Query, 484 a.a., sigma-54-dependent Fis family transcriptional regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 466 a.a., Fis family transcriptional regulator from Burkholderia phytofirmans PsJN

 Score =  256 bits (655), Expect = 9e-73
 Identities = 164/467 (35%), Positives = 258/467 (55%), Gaps = 29/467 (6%)

Query: 18  VLLVDDEVGMQLVLKKALSKWFSRVDLASSIEEAEVLRGEHHYDLLILDINLPGRSGIEW 77
           VL+VDD+ G +  L   + +       A  + EA +       D++  D+ LP  SG++ 
Sbjct: 4   VLIVDDDAGTREALSAIIGEDGLTTATAGDLREARIQLVRQMPDVVFTDLKLPDGSGVDL 63

Query: 78  EEAFTDPDHRADVIFMTGFADLETAISALKLGASDFILKPFNLEQMLQAVQRCMNKRLNE 137
            E   DP    +VI +TG A +E+A++ALK+GA+D+++KP N++++   + R       +
Sbjct: 64  FEDL-DPRSGVEVIVITGHATVESAVNALKMGATDYLVKPINMQRVKAILSRLPRAGDLK 122

Query: 138 RLQYALQRDFQRHCTTQI-IGSSVQTELLKQRIVQFAPSRASVLIEGESGTGKELVARGI 196
                L+ + +R     + +G+S   + +  +I + AP+ ASV++ GESGTGKE+ A+ +
Sbjct: 123 AEIGTLRGELRRMGRFGLMLGNSPAMQEVYDQIGRVAPTAASVMLVGESGTGKEVAAQTL 182

Query: 197 HEAS-GRQGPFVPINCGAIAPELLESELFGHTSGAFTGAKKSREGLFRVANGGTLFLDEI 255
           H+ S  R+  F+ +NCGAI+P L+ESE+FGH  G+FTGA +  +G F  ANGGTLFLDEI
Sbjct: 183 HQLSLRRKHAFLAVNCGAISPNLIESEMFGHERGSFTGADRQHKGYFERANGGTLFLDEI 242

Query: 256 GEMPLTMQASLLRVLEQRAVRPVGSEKEVNVDVRVVAATNRNLQQEVENGRFRGDLYYRL 315
            EMP+ +Q  LLRVLE      VG+ KE+  DVR++AATNR+ +Q V  G+ R DLY+RL
Sbjct: 243 TEMPIELQVKLLRVLETGMFMRVGTTKEIETDVRLIAATNRDPEQAVLEGKLRLDLYHRL 302

Query: 316 NVLKIEVSPLRERKQDLHELLPFFTKMLCAELGMPMPKWAYEDISSMQDYDWPGNIRELK 375
           NV  I + PLRER +D+  L   F   L  E       +       +  Y WPGN+RELK
Sbjct: 303 NVFPISLPPLRERGKDVELLAQAFLDEL-NERHSTKKHFPAAVKDMLMSYPWPGNVRELK 361

Query: 376 NLIERCLLLGKPPAHYWRELNGLPIYAEPEVTMSQSNNSEISLGDNVTQPSLGYPNDWPL 435
           N ++R  ++                           + + + L   +++P+ G     P 
Sbjct: 362 NYVQRAHIMS---------------------GADSDSTATVPLQITLSKPAAGTAITIPF 400

Query: 436 -SAVEKAHIQQIVALHE---GNKSAAARDLGVARKTLERKYKEWESE 478
            +++ +A  Q I+A  E   G K+ AA  LG++ KTL  +  E+ ++
Sbjct: 401 GTSLAEADRQLILATLEQCGGVKTRAAEILGISLKTLYNRLVEYGND 447