Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 696 a.a., Sensor histidine kinase/response regulator from Pseudomonas fluorescens FW300-N2E2

 Score =  111 bits (278), Expect = 1e-28
 Identities = 92/307 (29%), Positives = 153/307 (49%), Gaps = 28/307 (9%)

Query: 387 MLDQLQQRNEEIVQAAHELEAKVQSRTASLQEKTAQLEHHI----ALLNQTRNKLVVHEK 442
           +L ++ +R+   ++ A   +A V+   A+L E  A LE  +      L QT   L   +K
Sbjct: 267 LLMEVTERSWAHIERARA-DAAVREGLAALAELNATLEERVEERTTRLKQTEAALRQSQK 325

Query: 443 LAALGELTAGIAHEINNPTAVILGNTELIRFELGADASRVEEEIDAILLQIERIRNITRS 502
           L A+G+LT G+AH+ NN   +I  + + +R +      R +  + A+   +ER   +T  
Sbjct: 326 LEAIGQLTGGVAHDFNNLLTIIRSSVDFLR-KPSLSEERRQRYMTAVSETVERASKLTSQ 384

Query: 503 LLQYSRQGGVQDEI--TWQHVNPIIDESITLVKTGSKKRDIEFVLELKAHNS-VEVNRHQ 559
           LL ++R+  ++ ++    + V  + D   T+  TG++   I+  +EL      +  +  Q
Sbjct: 385 LLAFARRQPLKPQVIDVGKQVQSLGDMLQTV--TGAR---IQVHVELCDRPCYIRADLSQ 439

Query: 560 LLQILVNLQMNAIHAMNGKGRITIRSEDWVEEGQNRG--------AVIHIEDQGCGIKPE 611
               L+N+ +NA  AMNG+G + +R          RG        A I + D G GI   
Sbjct: 440 FETALINIALNARDAMNGQGTLWLRLSCGGGMPPIRGHAGAGQSFAAIALADTGTGIDSP 499

Query: 612 NLKRIFDPFYTTKR--EGTGLGLSVSQSLLSQSGGEIKVQSELGVGSTFSIFL----PSK 665
            L+ IF+PF+TTK   +GTGLGLS       QSGG + V + +G G+ F+++L    P K
Sbjct: 500 VLEHIFEPFFTTKEVGKGTGLGLSQVFGFAKQSGGNVDVSTVVGEGTVFTLYLPEVAPEK 559

Query: 666 NEAKLRE 672
           N   +RE
Sbjct: 560 NHEPVRE 566



 Score = 27.3 bits (59), Expect = 0.002
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 282 AWYITAYEPIRDQYHNEIGMLYT 304
           A++   Y PIRDQ+   +GML T
Sbjct: 89  AYFTFCYSPIRDQFGKVVGMLDT 111