Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 729 a.a., diguanylate cyclase from Pseudomonas fluorescens FW300-N2C3

 Score =  112 bits (280), Expect = 6e-29
 Identities = 90/305 (29%), Positives = 149/305 (48%), Gaps = 24/305 (7%)

Query: 387 MLDQLQQRNEEIVQAAHELEAKVQSRTASLQEKTAQLEHHI----ALLNQTRNKLVVHEK 442
           +L ++ +R+   ++ A   +A V+   A+L E  A LE  +      L QT   L   +K
Sbjct: 300 LLMEVTERSWAHIERARA-DAAVREGLAALAELNATLEERVEERTTRLKQTEAALRQSQK 358

Query: 443 LAALGELTAGIAHEINNPTAVILGNTELIRFELGADASRVEEEIDAILLQIERIRNITRS 502
           L A+G+LT G+AH+ NN   +I  + + +R        R +  + A+   +ER   +T  
Sbjct: 359 LEAIGQLTGGVAHDFNNLLTIIRSSVDFLRMP-NLSEERRQRYMTAVSETVERASKLTSQ 417

Query: 503 LLQYSRQGGVQDEITWQHVNPIIDESITLVKTGSKKRDIEFVLELKAHNS-VEVNRHQLL 561
           LL ++R+  ++ E+       +    +    TG++   I+  +EL      +  +  Q  
Sbjct: 418 LLAFARRQPLKPEVIDVAKQVLSLGDMLQTVTGAR---IQVNVELCDRPCYIRADLSQFE 474

Query: 562 QILVNLQMNAIHAMNGKGRITIRSEDWVEEGQNRG--------AVIHIEDQGCGIKPENL 613
             L+N+ +NA  AMNG+G + +R          RG        A I + D G GI  + L
Sbjct: 475 TALINMALNARDAMNGQGTLWLRLSCDGGMPPIRGHAGAGQSFAAIALADTGTGIDSQVL 534

Query: 614 KRIFDPFYTTKR--EGTGLGLSVSQSLLSQSGGEIKVQSELGVGSTFSIFL----PSKNE 667
           + IF+PF+TTK   +GTGLGLS       QSGG + V + +G G+ F+++L    P +N 
Sbjct: 535 EHIFEPFFTTKEVGKGTGLGLSQVFGFAKQSGGNVDVSTVVGEGAVFTLYLPEVAPEQNH 594

Query: 668 AKLRE 672
             LRE
Sbjct: 595 EPLRE 599



 Score = 27.3 bits (59), Expect = 0.003
 Identities = 11/23 (47%), Positives = 15/23 (65%)

Query: 282 AWYITAYEPIRDQYHNEIGMLYT 304
           A++   Y PIRDQ+   +GML T
Sbjct: 122 AYFTFCYSPIRDQFGTVVGMLDT 144