Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., PAS from Pseudomonas syringae pv. syringae B728a

 Score =  121 bits (304), Expect = 9e-32
 Identities = 92/280 (32%), Positives = 141/280 (50%), Gaps = 28/280 (10%)

Query: 400 QAAHELEAKVQSRTASLQEKTAQLEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINN 459
           QA  +L    ++    ++E+T+QL H   +L Q+       +K+ A+G+LT GIAH+ NN
Sbjct: 267 QAESQLRRLNETLEQQVEERTSQLRHKEEILRQS-------QKMEAVGQLTGGIAHDFNN 319

Query: 460 PTAVILGNTELIRFELGADASR-VEEEIDAILLQIERIRNITRSLLQYSRQGGVQDE-IT 517
               I+G+ ELIR  L    +  +   ID  +    R   +T  LL +SR+  +  + + 
Sbjct: 320 MLTGIIGSLELIRRRLARGRTEDLNSLIDLGVTSANRAAALTHRLLAFSRRQSLDSKPVE 379

Query: 518 WQHVNPIIDESITLVKTGSKKRDIEFVLELKAHN--SVEVNRHQLLQILVNLQMNAIHAM 575
             H+   +DE +      S    I   L L AH+  + E + +QL   L+NL +NA  AM
Sbjct: 380 MNHLVNAMDELLQR----SVNESIHLQLRL-AHDLWTAEADPNQLESALLNLVLNARDAM 434

Query: 576 NGKGRITI--------RSEDWVEEGQNRG--AVIHIEDQGCGIKPENLKRIFDPFYTTKR 625
              G + +        RS     E    G   V+ + D GCG+    + R FDPF+TTK 
Sbjct: 435 PDGGTLVVETFNQQLDRSFTNAHENLLPGDYVVLSVSDNGCGMPETVISRAFDPFFTTKP 494

Query: 626 --EGTGLGLSVSQSLLSQSGGEIKVQSELGVGSTFSIFLP 663
             +GTGLGLS+      QS G + ++SE+GVG+T  +FLP
Sbjct: 495 IGQGTGLGLSMIYGFSKQSHGHVLIKSEVGVGTTVQLFLP 534