Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 956 a.a., PAS/PAC sensor hybrid histidine kinase from Pseudomonas syringae pv. syringae B728a

 Score =  112 bits (281), Expect = 6e-29
 Identities = 90/297 (30%), Positives = 145/297 (48%), Gaps = 32/297 (10%)

Query: 399 VQAAHELEAKVQSRTASLQEKTAQLEHHIAL----LNQTRNKLVVHEKLAALGELTAGIA 454
           V     + A+    TA+L+     LE  +A     L Q   KL   +K+ A+G+LT G+A
Sbjct: 534 VDERRAVAAERDRATAALRALNDTLEQRVAARTTELMQAEEKLRQSQKMEAVGQLTGGLA 593

Query: 455 HEINNPTAVILGNTELIRFELGADASRVEE----EIDAILLQIE----RIRNITRSLLQY 506
           H+ NN  A I G  EL+        +R+E+    E+D  ++  +    R   +T  LL +
Sbjct: 594 HDFNNLLAGISGALELM-------GTRIEQGRWGEVDKYIVTAQGAAKRAAALTHRLLAF 646

Query: 507 SRQGGVQDEITWQHVNPIIDESITLVKTGSKKRDIEFVLELKAHNSVEVNRHQLLQILVN 566
           SR+  +  + T   VN ++     L++       +   L         V+  QL   L+N
Sbjct: 647 SRRQTLDPQPT--DVNRLMKGMTDLIQRTVGPSIVVETLGATGLWPTLVDASQLENALLN 704

Query: 567 LQMNAIHAMNGKGRITIRSED-WVEEGQNRG--------AVIHIEDQGCGIKPENLKRIF 617
           L +NA  AM   GRITI + + W++    R           + + D G G+ P+ + + F
Sbjct: 705 LCINARDAMPDGGRITIEASNRWIDGDVARAHDMPEGHYLSLCVTDTGTGMTPDVIAKAF 764

Query: 618 DPFYTTKR--EGTGLGLSVSQSLLSQSGGEIKVQSELGVGSTFSIFLPSKNEAKLRE 672
           DPF+TTK   +GTGLGLS+     +QSGG +++QSE+G G+  S++LP  +    R+
Sbjct: 765 DPFFTTKPIGQGTGLGLSMIYGFANQSGGRVRIQSEVGKGTAISLYLPRYDGTAARD 821