Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 656 a.a., putative signal transduction histidine kinase from Phaeobacter inhibens DSM 17395

 Score =  345 bits (884), Expect = 5e-99
 Identities = 226/670 (33%), Positives = 366/670 (54%), Gaps = 44/670 (6%)

Query: 18  TVRYRLWILTSAPIFLTL-LALIAITIYWSLHYTWNSALIDVSERLGVAQNSVTLLQQKQ 76
           +VR RL +L   P+ + + L L+     W+  Y  N  +++V   L +A   +  LQ   
Sbjct: 3   SVRLRLLLLALLPLSVVMPLLLVVAMARWNADYD-NVLIVNVESDLKIADQYLRQLQANS 61

Query: 77  ANHVRAFAESYDFRKRLQEPETLSTLPRWVQNQKNRYGLDFLSFERVDSLEQKFRYLDLT 136
            + + A A S  F K L+ P  L    R++  ++    LDFL +  + ++++  R   + 
Sbjct: 62  GDDLAAIASSTQFAKVLRAP--LQDQLRFLDQRRQALRLDFLYYLPMRNIDRDARRWPVI 119

Query: 137 KRE------SFFDVLSADELEKLDPDLAKQAQIPILNSQQI-------ETRGLVSRTVIP 183
            R       S  D+ +A +L+ +  DL  +A+IP++ ++         E RG+V  +  P
Sbjct: 120 SRAAQGDLASEIDIFAAADLDVISADLRNRARIPLIETEAAAPTTRPAEDRGMVIHSAAP 179

Query: 184 VRNDFGEIIGFLDGGLLLNNSTTLVDQIRDLIYPSHQDQLRPTGTLTLFLDDLRVSTNVP 243
           V     E  G L  G LLN     +D I  L+Y     ++   GT TLFLDD R+STNV 
Sbjct: 180 VTTPGSE--GVLVAGRLLNRDLDFIDTINALVYLGDSHRISRKGTATLFLDDTRISTNVR 237

Query: 244 LDSNIHAGRAIGTRVSSEVFNQVLKGGQQWVNLAYVYDAWYITAYEPIRDQYHNEIGMLY 303
           L  ++   RA+GTRVS  V + VL  GQ W++ A+V + WYI+ Y P+ D +   +GMLY
Sbjct: 238 LFEDV---RALGTRVSQAVRDAVLGDGQTWLDRAFVVNDWYISGYLPLTDSFGKRVGMLY 294

Query: 304 TGYLMWPFLKAYVTNILEVGIITLFLLVISGLFVYRGSRDLFRPIERIHRVVKMVQLGK- 362
            G+L  PF  A V+    V +  L +L++S       ++ +F P+E++   +  V+ G  
Sbjct: 295 VGFLEAPFAAAKVSAYWTVVLSFLSVLLLSAPLFLWLAKGIFAPLEQMSHTMARVERGDL 354

Query: 363 NQRIGQIGLDDKHELAQLAKQFDNMLDQLQQRNEEIVQAAHELEAKVQSRTASLQEKTAQ 422
             R G +G  D  E+ Q+A   D++LDQ+Q R++++   A EL  +V  RTA L+    +
Sbjct: 355 AARNGNVGRRD--EIGQVAAHLDSLLDQVQDRDQKLRDWAGELNDRVDQRTAELRAANDK 412

Query: 423 LEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINNPTAVILGNTELIRFELGADASRV 482
           LE        T  +LV+ EKLA++GE+TAG+AHEINNP AVI GN +++R  LG     V
Sbjct: 413 LE-------ATYKQLVMSEKLASIGEITAGVAHEINNPIAVIQGNVDVMRMTLGTATEDV 465

Query: 483 EEEIDAILLQIERIRNITRSLLQYSRQ---GGVQDEITWQHVNPIIDESITLVKTGSKKR 539
           E E+  I  QI RI  I   LLQ++R    G  ++ +    + P++ + + LV     K+
Sbjct: 466 ETELALIDDQILRISAIVGKLLQFARPTEFGTFEERL---DLAPVVSDCLVLVDHVVTKQ 522

Query: 540 DIEFVLELKAHNSVEVNRHQLLQILVNLQMNAIHAMNGKGRITIRSEDWVEEGQNRGAVI 599
           D+  + +     +V ++  +L Q+++NL +NA+ AM G G++ +   + ++     GA +
Sbjct: 523 DVAVIKQFSETPAVRIDPGELQQVVINLILNAVQAMEGSGQLVLTLRE-MDRNDVSGACL 581

Query: 600 HIEDQGCGIKPENLKRIFDPFYTTK-REGTGLGLSVSQSLLSQSGGEIKVQSELG----V 654
            + D G GI  ++L  +F+PFYTTK  EGTGLGLS+SQ+L+ ++GG I V++ +     +
Sbjct: 582 EVADTGSGIAAKDLPSVFNPFYTTKLGEGTGLGLSISQTLIQRAGGVISVENRVEDGKII 641

Query: 655 GSTFSIFLPS 664
           G+ FSI+LP+
Sbjct: 642 GAVFSIWLPA 651