Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 713 a.a., integral membrane sensor signal transduction histidine kinase (RefSeq) from Shewanella loihica PV-4

 Score =  570 bits (1468), Expect = e-166
 Identities = 313/680 (46%), Positives = 440/680 (64%), Gaps = 26/680 (3%)

Query: 8   WQKWRHRFQTTVRYRLWILTSAPIFLTLLALIAITIYWSLHYTWNSALIDVSERLGVAQN 67
           WQ+     Q  VRYR+ ILT  PI LTL++L+ ITIYW++ YT     + V   L VA N
Sbjct: 12  WQQ----LQAKVRYRILILTLLPILLTLVSLVFITIYWNISYTGKQLFMKVKADLTVASN 67

Query: 68  SVTLLQQKQANHVRAFAESYDFRKRLQEPETLSTLPRW-----VQNQKNRYGLDFLSFER 122
           ++  +Q+KQ N +     S++F+   ++ +T S   R      ++ ++    LDFL    
Sbjct: 68  TLISVQEKQENQLELVRASWEFQNEFRDLDTDSKAARTQLAELLKQKQAELDLDFLRLIS 127

Query: 123 VDSLEQ----KFRYLDLTKRESFFD--VLSADELEKLDPDLAKQAQIPILN-------SQ 169
           V    Q    +     +   + F    VL    L +L P+L ++A I +++       S+
Sbjct: 128 VSEAAQDPDLRVMLPKIQDNQPFSGLMVLQPQRLARLAPNLEQEAVITLVDTPRSQKPSK 187

Query: 170 QIETRGLVSRTVIPVRNDFGEIIGFLDGGLLLNNSTTLVDQIRDLIYPSHQDQLRPTGTL 229
            +E RG++SR+++P+    G +  +LDGG+LLN    +VD IRDL+Y       R  GT+
Sbjct: 188 DVEKRGMLSRSLLPILGSDGTVGWYLDGGILLNRDIRIVDHIRDLVYDKGTLPERSIGTV 247

Query: 230 TLFLDDLRVSTNVPLD----SNIHAGRAIGTRVSSEVFNQVLKGGQQWVNLAYVYDAWYI 285
           T+FLD+ R+STNVPL+     +   GRA+G+ VS EV  +VL  G  WV+ A+VY+ W+I
Sbjct: 248 TIFLDNTRISTNVPLNFFPQDSEKRGRALGSLVSEEVRQKVLVQGLLWVDRAFVYNDWFI 307

Query: 286 TAYEPIRDQYHNEIGMLYTGYLMWPFLKAYVTNILEVGIITLFLLVISGLFVYRGSRDLF 345
           +AY P++D     IGM+YTG+   PF+  Y+ NI+E+G I + +L++SGL VYRG+  L 
Sbjct: 308 SAYAPLKDIRGERIGMIYTGFSESPFIHNYLLNIIELGTILMLVLLVSGLLVYRGAYSLL 367

Query: 346 RPIERIHRVVKMVQLGKNQRIGQIGLDDKHELAQLAKQFDNMLDQLQQRNEEIVQAAHEL 405
           +PIERIH VVK VQ G+N RIG +GL+  +ELA LA+QFD MLD LQ+RN +I  AA +L
Sbjct: 368 QPIERIHHVVKAVQSGRNLRIGSLGLERDNELANLAEQFDRMLDLLQRRNSQIQAAAEQL 427

Query: 406 EAKVQSRTASLQEKTAQLEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINNPTAVIL 465
           E KV+ RT SLQEKT +L+ ++ALLN+TR +LV +EKL ALGELTAGIAHEINNPTAVIL
Sbjct: 428 EVKVEERTRSLQEKTEELQRNVALLNETRQQLVTNEKLTALGELTAGIAHEINNPTAVIL 487

Query: 466 GNTELIRFELGADASRVEEEIDAILLQIERIRNITRSLLQYSRQGGVQDEITWQHVNPII 525
           GN EL++ ELG  A  VEEEID ++ Q+ RI  I RSLLQYSR G     +    + PI+
Sbjct: 488 GNMELLKSELGDKAEDVEEEIDIVIEQVGRISTIIRSLLQYSRPGEFNAPLEMHQLTPIV 547

Query: 526 DESITLVKTGSKKRDIEFVLELKAHNSVEVNRHQLLQILVNLQMNAIHAMNGKGRITIRS 585
           +E   LV+   KK+++  + +L A   +EVNR QLLQ+L+NL +NA HAM+G+GRI IR+
Sbjct: 548 EEMAILVRHSIKKQEVVLIQDLNASYPIEVNRPQLLQVLINLVVNAAHAMDGQGRIWIRT 607

Query: 586 EDWVEEGQNRGAVIHIEDQGCGIKPENLKRIFDPFYTTKREGTGLGLSVSQSLLSQSGGE 645
            DWV+ G+  G  I +ED+G GI  E L RIFDPFYTT+++GTGLGLS+S  ++ + GG 
Sbjct: 608 YDWVQGGEPIGVKIEVEDEGKGIPEEQLGRIFDPFYTTRQDGTGLGLSLSYGIIKRIGGT 667

Query: 646 IKVQSELGVGSTFSIFLPSK 665
           I+V S +G G+ F+I L  K
Sbjct: 668 IEVSSTVGKGTLFTIGLYHK 687