Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 419 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  110 bits (275), Expect = 1e-28
 Identities = 85/289 (29%), Positives = 138/289 (47%), Gaps = 52/289 (17%)

Query: 415 SLQEKTAQLEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINNPTAVILGNTELIRFE 474
           +LQ+    LE     L QT ++L+  EKLAA+G+L AG+AHEIN P   I  N       
Sbjct: 137 ALQDTLTSLEQTNRRLTQTHDQLLHAEKLAAIGQLAAGVAHEINTPLGYIQSN------- 189

Query: 475 LGADASRVEEEIDAI----------------LLQIERIRNITRSLLQYSRQGGVQDEITW 518
           LGA A  +E+ +  +                 + ++ +R     +L  +RQG  +     
Sbjct: 190 LGAMARHLEDLLTLVDAYESAAAGQQPPGRERIDLDFLRQDAPQVLAETRQGISRVSTVV 249

Query: 519 QHVNPIIDESITLVKTGSKKRDIEFVLELKAHNSVEVNRH-------------------Q 559
           +H   +++ S T      ++ D+E +    A  + +  RH                   +
Sbjct: 250 RH---LLEFSSTCASGEWRQADLEAICRTAAERACQ-KRHNFRLEQRYDALPPLHCLPER 305

Query: 560 LLQILVNLQMNAIHAMNGKGRITIRSEDWVEEGQNRGAVIHIEDQGCGIKPENLKRIFDP 619
           L Q L NL  NA+ A+  +G + +           R   + +ED GCGI P++L+ IF+P
Sbjct: 306 LQQALENLIDNALLAIPAEGMVRLHGSC----PDGRQICLTVEDNGCGIAPQHLESIFNP 361

Query: 620 FYTTK--REGTGLGLSVSQSLLSQSGGEIKVQSELGVGSTFSIFLPSKN 666
           F+TT+    G G+GLSV+ ++    GG I+V+S  G+GS F++ LP +N
Sbjct: 362 FFTTRPVGSGEGMGLSVADTVARLHGGNIEVESSPGLGSRFTLHLPLQN 410