Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., histidine kinase,HAMP domain-containing protein,histidine kinase from Dechlorosoma suillum PS

 Score =  357 bits (915), Expect = e-102
 Identities = 247/695 (35%), Positives = 381/695 (54%), Gaps = 61/695 (8%)

Query: 15  FQTTVRYRLWILTSAPIFLTLLALIAITIYWSLHYTWNSALID-VSERLGVAQNSVTLLQ 73
           F  +VR +L  L  AP+ L +  L+ I   W     +N  L++ VS  L  A+     +Q
Sbjct: 23  FAGSVRLKLLALVLAPLLLGVPVLLLIVWIWGTQ-GYNQLLVNKVSSDLVTARQFFDRVQ 81

Query: 74  QKQANHVRAFAESYDFRKRLQE--PETLSTLPRWVQNQKNRYGLDFL----SFERV---- 123
              + ++  F+ S+   + LQ   P+ +  L   +Q      GLD+L    S  RV    
Sbjct: 82  SGVSLNLEGFSSSHRLLQALQRGAPDDMDLL---LQEAALAQGLDYLVLLDSHGRVRAGG 138

Query: 124 ---------DSLEQKFRYLDLTKRESFFDVLSADELEKLDPDLAKQAQIPIL-------N 167
                    D ++   +     + +   +V + ++L++L P L ++A + +L       +
Sbjct: 139 RGPVDRSAWDVVQSALQ----GRGQHGLEVFAPEQLDELAPALRQRAHLDLLPTRNASPD 194

Query: 168 SQQIETRGLVSRTVIPVRNDFGEIIGFLDGGLLLNNSTTLVDQIRDLIYPSHQDQLRPTG 227
            ++ E RGLV +  +PV    G+++G L+GG+LLN +  +VD+I  ++Y      L   G
Sbjct: 195 PRRAEDRGLVIQAAVPVLGSEGQMLGVLEGGVLLNGNLGIVDRINTIVYQQASLPLGSQG 254

Query: 228 TLTLFLDDLRVSTNVPLDSNIHAGRAIGTRVSSEVFNQVLKGGQQWVNLAYVYDAWYITA 287
           T TLFL D R++TNV L       RA+GTRVS  V ++VL  G+ W+  A+V D  Y++ 
Sbjct: 255 TATLFLGDTRIATNVRL---FEGRRALGTRVSQAVRDKVLGRGEVWLGSAFVVDDTYVSG 311

Query: 288 YEPIRDQYHNEIGMLYTGYLMWPFLKAYVTNILEVGIITLFLLV--ISGLFVYRGSRDLF 345
           YEP+ +     +GMLY G+L  P   A    +   G+  LFLLV  +  L   R ++ +F
Sbjct: 312 YEPLLNLRGERVGMLYVGFLEAPLQTALHGAL--AGLFLLFLLVSGLGTLAALRWAQTIF 369

Query: 346 RPIERIHRVVKMVQLGKNQ-RIGQIGLDDKHELAQLAKQFDNMLDQLQQRNEEIVQAAHE 404
           RPIER++RV+  ++ G+   R+G      K EL +L++ FD++LD L  R  E+ ++A E
Sbjct: 370 RPIERMNRVMARIEAGEETARVGPSA--SKDELGRLSRAFDHLLDSLSARRLELQRSADE 427

Query: 405 LEAKVQSRTASLQEKTAQLEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINNPTAVI 464
           L+ KV  RTA+L+E  A L        + + +LV++EKL A+GELTAG+AHEINNP AVI
Sbjct: 428 LDRKVAERTAALEEANATLR-------RAQQQLVMNEKLTAIGELTAGVAHEINNPVAVI 480

Query: 465 LGNTELIRFELGADASRVEEEIDAILLQIERIRNITRSLLQYSRQGGVQDEITWQHVNPI 524
            GN EL+R  LG  A  V  EI  I  Q +RIR I   LLQ++R G          VN +
Sbjct: 481 QGNLELLRDVLGEQAEPVRGEIRLIDEQTQRIRAIVTRLLQFARPGDFAGYAEATDVNGV 540

Query: 525 IDESITLVKTGSKKRDIEFVLELKAHNSVEVNRHQLLQILVNLQMNAIHAMNGKGRITIR 584
           + + + L +    K  ++    L+A  +VE+NR +L Q+L+NL MNA+ AM   G +++ 
Sbjct: 541 VADCLVLTRHNLNKAGVKVETRLEACCNVEMNRGELQQVLINLMMNAMQAMPQGGTLSME 600

Query: 585 SED------WVEEGQNRGAVIHIEDQGCGIKPENLKRIFDPFYTTKR-EGTGLGLSVSQS 637
           S D         E    GA++ + D G GI P +L RIFDPF+TTK+ EGTGLGLS+S +
Sbjct: 601 SRDIGPGDAIPGEASFPGALLRVRDTGHGIAPADLDRIFDPFFTTKKQEGTGLGLSISYA 660

Query: 638 LLSQSGGEIKVQSELGVGSTFSIFLPSKNEAKLRE 672
           ++ + GG I V+S  G  +TF+++L  + EA+  E
Sbjct: 661 IIQRYGGRISVESAPGEHTTFTLWL--RREAQYTE 693