Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 1013 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  117 bits (292), Expect = 3e-30
 Identities = 86/287 (29%), Positives = 143/287 (49%), Gaps = 48/287 (16%)

Query: 416 LQEKTAQLEHHIALLNQTRNKLVVHEKLAALGELTAGIAHEINNPTAVILGNTELIRFEL 475
           LQ+  A+ +     L + +++L+  EK+A++G+L AG+AHE+NNP   +  N   +   L
Sbjct: 718 LQQALAEAKALNQRLAEAQSQLLQSEKMASIGQLAAGVAHEMNNPIGFVYSNLGTLDHYL 777

Query: 476 -----------GADAS--------------RVEEEIDAILLQI-----------ERIRNI 499
                       AD+               ++E++ D +   I           ER+  I
Sbjct: 778 REIFAIIAAYEAADSGPCRDCRQLESARQLKLEKDFDFLRSDIVQLLAESRDGLERVAKI 837

Query: 500 TRSLLQYSRQGGVQDEITWQHVNPIIDESITLVKTGSKKRDIEFVLELKAHNSVEVNRHQ 559
            R L  +SR G  + +  W  ++  +D ++ +V    K +      E      V     Q
Sbjct: 838 ARDLKDFSRAGEAESQ--WADLHQGLDSTLNIVWNELKYK-CTVHKEYGELPLVWCEPSQ 894

Query: 560 LLQILVNLQMNAIHAMNGKGRITIRSEDWVEEGQNRGAV-IHIEDQGCGIKPENLKRIFD 618
           + Q+ +NL +NA  A+  KG I      W+  G+    V + + D GCGI PE L R+F+
Sbjct: 895 INQVFMNLLVNAAQAIPKKGDI------WLRTGRRGDEVFVAVSDSGCGIAPEYLHRLFE 948

Query: 619 PFYTTK--REGTGLGLSVSQSLLSQSGGEIKVQSELGVGSTFSIFLP 663
           PF+TTK   +GTGLGLS++ S++ +  G ++V+SE G GSTF+++LP
Sbjct: 949 PFFTTKPVGKGTGLGLSLAYSIVQKHQGRLEVESEPGRGSTFTVWLP 995