Pairwise Alignments

Query, 677 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 736 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score =  142 bits (357), Expect = 7e-38
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 48/316 (15%)

Query: 391 LQQRNEEIVQAAHELEAKVQSRTAS---LQEKTAQLEHHIALLNQTRNKLVVHEKLAALG 447
           +++R  ++  A   LE  V+ R AS   L+++ A+L      L + + +LV  EK+A++G
Sbjct: 416 VERRTAQLSLAKQALEEDVRRREASENELRQRNAELLEVNKRLQEAQEQLVQSEKMASIG 475

Query: 448 ELTAGIAHEINNPTAVILGNTELI--------------------------------RFEL 475
           +L AG+AHEINNP   +  N   +                                R + 
Sbjct: 476 QLAAGVAHEINNPIGYVQSNLSTLGRYLEDMQTVLDSLATAVAQLPSEHPAAQAVARVKQ 535

Query: 476 GADASRVEEEIDAILLQ----IERIRNITRSLLQYSRQGGVQDEITWQHVNPIIDESITL 531
             D   + E++ +++ Q    I+R+R I   L  +SR    QD   W  ++  +D ++ +
Sbjct: 536 DLDFDFLLEDLPSLVTQSRDGIDRVRKIVADLKDFSRLDASQDW-QWADLHQGLDSTLNI 594

Query: 532 VKTGSKKRDIEFVLELKAHNSVEVNRHQLLQILVNLQMNAIHAM--NGKGRITIRSEDWV 589
           V    K R  E V E      VE    QL Q+ +NL +N+ HAM     GRIT+RS    
Sbjct: 595 VNNEIKYR-AEVVREYGQLPEVECLPSQLNQVFLNLLVNSAHAMPEGQMGRITLRSG--- 650

Query: 590 EEGQNRGAVIHIEDQGCGIKPENLKRIFDPFYTTK--REGTGLGLSVSQSLLSQSGGEIK 647
            +       + +ED G GI PEN+ R+FDPF+TTK   +GTGLGLS+S  ++ +  G+I 
Sbjct: 651 HDEPAHQVWLEVEDNGSGISPENMHRLFDPFFTTKPVGKGTGLGLSLSYGIVQKHHGQIT 710

Query: 648 VQSELGVGSTFSIFLP 663
           V SELG G+TF I LP
Sbjct: 711 VSSELGKGTTFRIVLP 726