Pairwise Alignments
Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Subject, 636 a.a., ATPase components of ABC transporters with duplicated ATPase domains from Pseudomonas stutzeri RCH2
Score = 302 bits (773), Expect = 3e-86
Identities = 183/526 (34%), Positives = 285/526 (54%), Gaps = 11/526 (2%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
MI N+T Q G + L E + G + GLIGANG GKST +L GE+ P GG+
Sbjct: 1 MIRLQNLTLQRGPQRLLEGAELTLHPGQKAGLIGANGAGKSTLFALLRGEMVPDGGDCQL 60
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
P+ R+A + Q+ + V D V+ G EL +V++E A E DG +A L
Sbjct: 61 PPDWRIAHMRQEIDTLDRLAV-DYVLDGDVELRRVQRE----LAAAEQAH-DGNALARLH 114
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
E +DGY A+++A +LL +G EQ +SS + GW++R+ LAQ L D++LLD
Sbjct: 115 TELDNLDGYSADARARKLLAGLGFANEQMTLPVSSFSGGWRMRLNLAQALMCPSDLLLLD 174
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTN+LD+D I WLED L T+++ISHDR FL++V H+ L+ +L +Y G Y +
Sbjct: 175 EPTNHLDLDAILWLEDWLKGYPGTLLLISHDRDFLDAVVDHVIHLEQRKLTLYRGGYSAF 234
Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
+ + K++AQ A +++++ RF A A+KA+QA SR + ++ +L+E+ +
Sbjct: 235 ERTRAERLAQQQQAFEKQQAQRAHMESYIRRFKAQATKARQAQSRIKALE--RLEELAPA 292
Query: 301 SRQNPF-IRFEQSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKT 358
+PF RF ++ ++ L + G+ + + G R+ ++G NG GK+
Sbjct: 293 HVDSPFDFRFREADKVSSPLLDLAEARLGYGEKVVLEKVKLQLVPGARIGLLGPNGAGKS 352
Query: 359 TLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVR 418
TL+ TLA L P SG + EN +GY+AQ + + + Q + EQ +R
Sbjct: 353 TLIKTLAAELTPLSGRLQRGENLAVGYFAQHQLDSLDPKASPLLHL-QRIAPSEREQTLR 411
Query: 419 SFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNN 478
FLG F + V SGGE+ R+ L + KPN+LLLDEPTNH+D+E +L
Sbjct: 412 DFLGGFDFRGVRCDEPVLNFSGGEKARLALALIAWGKPNLLLLDEPTNHLDLEMRLALTM 471
Query: 479 ALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLK 524
AL+ ++G + VSHDR + S + + DG++ F G ++ +
Sbjct: 472 ALQDFEGAVLVVSHDRHLLKSTTDEFLLVADGQVQSFDGDLEDYAR 517
Score = 90.9 bits (224), Expect = 1e-22
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 29/212 (13%)
Query: 344 GERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQD-------------- 389
G++ +IG NG GK+TL L G + P G + + I + Q+
Sbjct: 27 GQKAGLIGANGAGKSTLFALLRGEMVPDGGDCQLPPDWRIAHMRQEIDTLDRLAVDYVLD 86
Query: 390 ------------HAHEFAEDLNLMEWMGQWRQEGDDEQV---VRSFLGRMLFGQDDIKKS 434
A E A D N + + D R L + F + +
Sbjct: 87 GDVELRRVQRELAAAEQAHDGNALARLHTELDNLDGYSADARARKLLAGLGFANEQMTLP 146
Query: 435 VKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTLFFVSHDR 494
V SGG + R+ L + +M ++LLLDEPTNH+D+++I L + L+ Y GTL +SHDR
Sbjct: 147 VSSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEDWLKGYPGTLLLISHDR 206
Query: 495 VFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
F+D++ +I + K+T ++G Y+ F ++R
Sbjct: 207 DFLDAVVDHVIHLEQRKLTLYRGGYSAFERTR 238
Score = 81.6 bits (200), Expect = 8e-20
Identities = 73/295 (24%), Positives = 123/295 (41%), Gaps = 38/295 (12%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
++ A +G K + E + ++ G R GL+G NG GKST +K L+ EL P G +
Sbjct: 312 LLDLAEARLGYGEKVVLEKVKLQLVPGARIGLLGPNGAGKSTLIKTLAAELTPLSGRLQR 371
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
N V FA + +D L ++ E T D + D
Sbjct: 372 GENLAVG-----YFAQHQLDSLDPKASPLLHLQRIAPSER------EQTLRDFLGGFDFR 420
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
G+ ++ + + + G K R+ LA I + P+++LLD
Sbjct: 421 ----------------------GVRCDEP---VLNFSGGEKARLALALIAWGKPNLLLLD 455
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTN+LD++ L L ++++SHDRH L S + G+++ + G+ ++Y
Sbjct: 456 EPTNHLDLEMRLALTMALQDFEGAVLVVSHDRHLLKSTTDEFLLVADGQVQSFDGDLEDY 515
Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLD 295
R R + + A A+ A+ A A+ +Q RQ DK++ D
Sbjct: 516 ARWLVDYRARQQPVASGEPA--ADKTDKRAQRQAAAALRQQLAPHKRQADKLEKD 568