Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., ABC transporter from Pseudomonas syringae pv. syringae B728a

 Score =  300 bits (769), Expect = 8e-86
 Identities = 182/527 (34%), Positives = 286/527 (54%), Gaps = 13/527 (2%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           MI   ++T Q G + L E+  +    G++ GLIGANG GKS+   +L GEL P  G+   
Sbjct: 1   MIRLQSLTLQRGPQRLLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLL 60

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
             + R+A + Q+    E   V D V+ G + L +V+       A      +DG   A L 
Sbjct: 61  PADWRIAHMRQEVDTLERLAV-DYVLDGDERLREVQSSLAEAEAA-----QDGAAQARLH 114

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
            E    DGY A+++A +LL  +G   EQ    + S + GW++R+ LAQ L    D++LLD
Sbjct: 115 SELDSADGYTADARARKLLAGLGFTNEQMERQVGSFSGGWRMRLNLAQALMCPSDLLLLD 174

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
           EPTN+LD+D I WLED L +   T+++ISHDR FL++V  H+A ++   + +Y G Y  +
Sbjct: 175 EPTNHLDLDAILWLEDWLKSYPGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAF 234

Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
             A  +   +      K++AQ A ++ ++ARF A A+KA+QA SR + ++  +++E+ A+
Sbjct: 235 ERARAERLAQQQQAYEKQQAQRAHMEKYIARFKAQATKARQAQSRIKALE--RMEELSAA 292

Query: 301 SRQNPF-IRFEQSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKT 358
              +PF   F +S ++    L + +   G+ D  +          G R+ ++G NG GK+
Sbjct: 293 HVDSPFNFVFRESDKISSPLLDLSDARLGYGDKTILEKVKLQLTPGARIGLLGPNGAGKS 352

Query: 359 TLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEF-AEDLNLMEWMGQWRQEGDDEQVV 417
           TL+  LAG LEP+SG     EN  +GY+AQ       A+   L+    Q     + EQ +
Sbjct: 353 TLIKNLAGELEPQSGRLVRGENLTVGYFAQHQLDSLDAKATPLLHL--QRLAPTEREQTL 410

Query: 418 RSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLN 477
           R FLG   F    + + V   SGGE+ R+ L  +   KPN+LLLDEPTNH+D+E   +L 
Sbjct: 411 RDFLGGFDFRGARLDEPVLNFSGGEKARLALALIAWEKPNLLLLDEPTNHLDLEMRLALT 470

Query: 478 NALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLK 524
            AL+++ G +  VSHDR  + S     + + DG++  F G   ++ +
Sbjct: 471 MALQEFGGAVLVVSHDRHLLKSTTDDFLLVADGRVQAFDGDLDDYTR 517



 Score = 89.0 bits (219), Expect = 5e-22
 Identities = 62/223 (27%), Positives = 101/223 (45%), Gaps = 29/223 (13%)

Query: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQ--DH 390
           L  +       G +  +IG NG GK++L   L G L P +G      +  I +  Q  D 
Sbjct: 16  LLEDAELTLHAGHKAGLIGANGAGKSSLFALLRGELTPDAGDCLLPADWRIAHMRQEVDT 75

Query: 391 AHEFAEDLNL-------------------MEWMGQWRQEGDDEQV--------VRSFLGR 423
               A D  L                    +   Q R   + +           R  L  
Sbjct: 76  LERLAVDYVLDGDERLREVQSSLAEAEAAQDGAAQARLHSELDSADGYTADARARKLLAG 135

Query: 424 MLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQY 483
           + F  + +++ V   SGG + R+ L + +M   ++LLLDEPTNH+D+++I  L + L+ Y
Sbjct: 136 LGFTNEQMERQVGSFSGGWRMRLNLAQALMCPSDLLLLDEPTNHLDLDAILWLEDWLKSY 195

Query: 484 KGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
            GTL  +SHDR F+D++   I  +   +IT ++G Y+ F ++R
Sbjct: 196 PGTLLLISHDRDFLDAVVDHIAHVEQRRITLYRGGYSAFERAR 238