Pairwise Alignments
Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Subject, 635 a.a., ABC transporter, ATP-binding protein (RefSeq) from Shewanella amazonensis SB2B
Score = 273 bits (697), Expect = 2e-77
Identities = 166/515 (32%), Positives = 281/515 (54%), Gaps = 15/515 (2%)
Query: 12 GAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNERVAKLNQ 71
G+K L + ++ G++ GL+GANG GKS+ + ++ G+L G++ R+A + Q
Sbjct: 12 GSKVLLDEANLTIYPGHKVGLVGANGTGKSSLLALIMGKLSLDKGDIQVPREWRIASVAQ 71
Query: 72 DQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAEMDGYMA 131
+ A E + ++ V+ G E +++ + T+ DG +ADL + + GY
Sbjct: 72 ETPALE-VSALEYVLDGDMEFRELEAALRKAE-----TDNDGHAIADLHGKLDAIGGYSI 125
Query: 132 ESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLDEPTNNLDIDTI 191
++AG LL +G E+ + S + GW++R+ LAQ L +++LLDEPTN+LD+DT+
Sbjct: 126 RARAGALLAGLGFSEEKQSVSVKSFSGGWRMRLNLAQALLCRSELLLLDEPTNHLDLDTM 185
Query: 192 RWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEYMTAATQARERL 251
WLED + + T+++ISHDR F++++ + ++ +L Y GNY + + +
Sbjct: 186 FWLEDWIKSYPGTLVLISHDRDFIDAIVDEIVHVENQKLNFYKGNYSTFERTRAERMAQQ 245
Query: 252 LSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKI-KLDEVKASSRQNPFIRFE 310
+++ + A +Q+FV RF ASKAKQA SR + ++K+ +L KA S+ ++ F
Sbjct: 246 QVAFERQQRERAHMQSFVDRFRYKASKAKQAQSRLKALEKMTELLPAKADSQF--YMEFR 303
Query: 311 QSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLE 369
+ L + +EN+S G+ + + + G R+ ++G NG GK+TL+ LA L+
Sbjct: 304 EPASLPNPLVAMENVSVGYGETPILGKVHLNLVPGARIGLLGRNGAGKSTLIKLLASELK 363
Query: 370 PRSGMYKWSENSNIGYYAQDHAHEF--AEDLNLMEWMGQWRQEGDDEQVVRSFLGRMLFG 427
P +G Y+ + IGY+AQ H E+ +D LM Q EQ +R FLG F
Sbjct: 364 PLTGKYEPNPGLTIGYFAQ-HQLEYLHMDDSPLMHL--QRLAPSHREQELRDFLGGFGFN 420
Query: 428 QDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTL 487
D V SGGE+ R++L L+ PN+LLLDEPTNH+D+E +L AL+ ++G +
Sbjct: 421 GDMALSPVAPFSGGEKARLVLALLVWQSPNLLLLDEPTNHLDLEMRHALTLALQTFEGAM 480
Query: 488 FFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEF 522
VSHDR + + G+++ F+G ++
Sbjct: 481 VIVSHDRHLLRLTCNDYYLVDAGQVSSFEGDLEDY 515
Score = 99.4 bits (246), Expect = 4e-25
Identities = 88/333 (26%), Positives = 149/333 (44%), Gaps = 66/333 (19%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
+++ N++ +G P+ + + G R GL+G NG GKST +K+L+ EL+P G
Sbjct: 312 LVAMENVSVGYGETPILGKVHLNLVPGARIGLLGRNGAGKSTLIKLLASELKPLTGKYEP 371
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
+P + Q Q Y + D+ +M + L +E++ + D
Sbjct: 372 NPGLTIGYFAQHQLEY--LHMDDSPLMHLQRLAPSHREQE---------------LRDFL 414
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAP---GWKLRVLLAQILFADPDIM 177
F +G MA +S VAP G K R++LA +++ P+++
Sbjct: 415 GGFG-FNGDMA---------------------LSPVAPFSGGEKARLVLALLVWQSPNLL 452
Query: 178 LLDEPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNY 237
LLDEPTN+LD++ L L M+I+SHDRH L C +D G++ + G+
Sbjct: 453 LLDEPTNHLDLEMRHALTLALQTFEGAMVIVSHDRHLLRLTCNDYYLVDAGQVSSFEGDL 512
Query: 238 DEY----MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIK 293
++Y + AA A + ++A++ AQ + + K+ + RQ K
Sbjct: 513 EDYHQWLLDAAKAAAAKASDNDAERPAQ-------------DKKQQKRLEAELRQ----K 555
Query: 294 LDEVKASSRQNPFIRFEQSKELFRNALIVENLS 326
L ++ +Q + EQ K R ALI E L+
Sbjct: 556 LSPLR---KQQTKLEDEQHKIASRLALIEERLA 585
Score = 93.6 bits (231), Expect = 2e-23
Identities = 63/223 (28%), Positives = 106/223 (47%), Gaps = 29/223 (13%)
Query: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQD--- 389
L N G +V ++G NG GK++LL + G L G + I AQ+
Sbjct: 16 LLDEANLTIYPGHKVGLVGANGTGKSSLLALIMGKLSLDKGDIQVPREWRIASVAQETPA 75
Query: 390 ---HAHEFA--EDLNLMEWMGQWRQEGDDEQ-----------------VVRSFLGRML-- 425
A E+ D+ E R+ D +R+ G +L
Sbjct: 76 LEVSALEYVLDGDMEFRELEAALRKAETDNDGHAIADLHGKLDAIGGYSIRARAGALLAG 135
Query: 426 --FGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQY 483
F ++ SVK SGG + R+ L + ++ + +LLLDEPTNH+D++++ L + ++ Y
Sbjct: 136 LGFSEEKQSVSVKSFSGGWRMRLNLAQALLCRSELLLLDEPTNHLDLDTMFWLEDWIKSY 195
Query: 484 KGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
GTL +SHDR F+D++ I+ + + K+ +KG Y+ F ++R
Sbjct: 196 PGTLVLISHDRDFIDAIVDEIVHVENQKLNFYKGNYSTFERTR 238