Pairwise Alignments
Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Subject, 645 a.a., ABC transporter component (NCBI) from Rhodospirillum rubrum S1H
Score = 280 bits (715), Expect = 2e-79
Identities = 171/529 (32%), Positives = 276/529 (52%), Gaps = 20/529 (3%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
M+ ++T + G + L + + EG R GLIG NG GK+T +++ GEL GG+++
Sbjct: 1 MLHIKSLTYRIGGRTLLDEATAHIPEGQRIGLIGRNGTGKTTLFRLILGELSGDGGSIAV 60
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
P RV ++ Q+ + T++D V+ E R + A E + D + ++
Sbjct: 61 RPRARVGQVAQEA-PDGDTTLLDCVLAADAE-------RASLLAALE-GDTDPHHLGEIH 111
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
+ + A ++AG +L +G E + + GW++RV LA LF+ PD++LLD
Sbjct: 112 DRLNAIGAHSAPARAGAILSGLGFSAEAQARAVGEFSGGWRMRVALAAALFSRPDLLLLD 171
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTN+LD++ WLE L T++IISHDR LN + LD G+L Y GN+D +
Sbjct: 172 EPTNHLDLEATLWLEGFLANYPGTLLIISHDRDLLNRAVGRIIHLDNGKLVAYAGNFDRF 231
Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
+ E ++ + +Q FV RF A A+KA+QA SR + +++++ E
Sbjct: 232 ERTRRERMEHQSKAFVRQTEERKRIQAFVDRFRAKATKARQAQSRLKMLERMQPVEAVVE 291
Query: 301 SRQNPFIRFEQSKELFRNALIVENLSQGFDH-DLFSNFNAIFEVGERVAIIGENGVGKTT 359
PF F +L + ++++ G+D + ++ +RVA++G NG GK+T
Sbjct: 292 DSTIPF-DFPDPDQLPPPIVAFDDVAAGYDGVAVLRGVTLRLDMEDRVALLGANGNGKST 350
Query: 360 LLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEF----AEDLNLMEWMGQWRQEGDDEQ 415
L LAG L P SG + IGY+AQ E + L+ MG+ +Q
Sbjct: 351 LAKVLAGRLAPLSGEIRMPSKLRIGYFAQHQTDELRMGESPLLHGRRLMGEL-----SDQ 405
Query: 416 VVRSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIES 475
+R LGR FG+D + V LSGGE+ R+L+ P++L+LDEPTNH+D++S ES
Sbjct: 406 KIRGHLGRFGFGEDRVHTPVANLSGGEKARLLIALTCREAPHLLILDEPTNHLDIDSRES 465
Query: 476 LNNALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLK 524
L AL ++G + +SHD V+ +A R+ + GK+T F+G ++ K
Sbjct: 466 LMQALNVFQGAVLLISHDPRLVEMVADRLWLVDGGKVTSFEGDMDDYRK 514
Score = 90.1 bits (222), Expect = 2e-22
Identities = 58/209 (27%), Positives = 92/209 (44%), Gaps = 26/209 (12%)
Query: 344 GERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHE--------FA 395
G+R+ +IG NG GKTTL + G L G + +G AQ+ A
Sbjct: 27 GQRIGLIGRNGTGKTTLFRLILGELSGDGGSIAVRPRARVGQVAQEAPDGDTTLLDCVLA 86
Query: 396 EDLNLMEWMGQWRQEGDDEQV------------------VRSFLGRMLFGQDDIKKSVKV 437
D + + D + + L + F + ++V
Sbjct: 87 ADAERASLLAALEGDTDPHHLGEIHDRLNAIGAHSAPARAGAILSGLGFSAEAQARAVGE 146
Query: 438 LSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTLFFVSHDRVFV 497
SGG + R+ L + +P++LLLDEPTNH+D+E+ L L Y GTL +SHDR +
Sbjct: 147 FSGGWRMRVALAAALFSRPDLLLLDEPTNHLDLEATLWLEGFLANYPGTLLIISHDRDLL 206
Query: 498 DSLATRIIEIRDGKITDFKGTYAEFLKSR 526
+ RII + +GK+ + G + F ++R
Sbjct: 207 NRAVGRIIHLDNGKLVAYAGNFDRFERTR 235
Score = 84.3 bits (207), Expect = 1e-20
Identities = 70/298 (23%), Positives = 129/298 (43%), Gaps = 47/298 (15%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
+++ ++ + + ++++ +R L+GANG GKST K+L+G L P G +
Sbjct: 309 IVAFDDVAAGYDGVAVLRGVTLRLDMEDRVALLGANGNGKSTLAKVLAGRLAPLSGEIRM 368
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
R+ Q Q D + MG L ++
Sbjct: 369 PSKLRIGYFAQHQ--------TDELRMGESPLLHGRR----------------------- 397
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
+ G +++ K L G ++ + +++++ G K R+L+A P +++LD
Sbjct: 398 -----LMGELSDQKIRGHLGRFGFGEDRVHTPVANLSGGEKARLLIALTCREAPHLLILD 452
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTN+LDID+ L LN +++ISHD + V + +D G++ + G+ D+Y
Sbjct: 453 EPTNHLDIDSRESLMQALNVFQGAVLLISHDPRLVEMVADRLWLVDGGKVTSFEGDMDDY 512
Query: 241 ----MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKL 294
+ A AR SD+A AE +A ++ A+Q RA +++L
Sbjct: 513 RKLLLERARDARREASSDSANAGEAAAE-------GAATSASARQDRRRAAAEARVRL 563