Pairwise Alignments
Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Subject, 636 a.a., ABC transporter-related protein (RefSeq) from Shewanella loihica PV-4
Score = 279 bits (714), Expect = 2e-79
Identities = 166/515 (32%), Positives = 288/515 (55%), Gaps = 15/515 (2%)
Query: 12 GAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNERVAKLNQ 71
G+K L + S+ G++ GL+GANG GKS+ + ++ G L G +S ++A + Q
Sbjct: 12 GSKTLLDEASLTVYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEISVPTGWQIATVAQ 71
Query: 72 DQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAEMDGYMA 131
+ A E + ++ VI G +E ++++ + E++G ++A L + + GY
Sbjct: 72 ETPALE-VSALEYVIDGDREYRELEEALHKA-----QLEDNGHQIALLHGKIDAIGGYSI 125
Query: 132 ESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLDEPTNNLDIDTI 191
++A LL +G + + S + GW++R+ LAQ L +++LLDEPTN+LD+DT+
Sbjct: 126 RARAASLLAGLGFSEAEQQNPVKSFSGGWRMRLNLAQALLCRSELLLLDEPTNHLDLDTM 185
Query: 192 RWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYD--EYMTAATQARE 249
WLE + A T+I+ISHDR F++++ + +++ +L Y GNY E + A A++
Sbjct: 186 YWLESWIKAYQGTLILISHDRDFIDAIVDEIVHVEHHKLNYYKGNYTAFERIRAERMAQQ 245
Query: 250 RLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRQNPFIRF 309
++ + +K+ A +Q+FV RF ASKAKQA SR + ++ ++ E+ S +PF
Sbjct: 246 QVAYERQQKER--AHMQSFVDRFRYKASKAKQAQSRLKALE--RMTELLPSKADSPFYMA 301
Query: 310 EQSKELFRNALI-VENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGV 367
++ E N L+ +E +S G+ D + ++ + G R+ ++G NG GK+TL+ LA
Sbjct: 302 FRAPEALPNPLVKMEQVSVGYGDKAILNHVHLNLVPGARIGLLGRNGAGKSTLIKLLAEQ 361
Query: 368 LEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVRSFLGRMLFG 427
L+P SG+Y+ + NIGY+AQ D + ++ + + + EQ +R FLG F
Sbjct: 362 LKPMSGLYEPNPGLNIGYFAQHQLEFLRLDESPLQHLTR-LAPNNREQELRDFLGGYGFN 420
Query: 428 QDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTL 487
D V+ SGGE+ R++L L+ +PN+LLLDEPTNH+D+E +L AL+ ++G +
Sbjct: 421 GDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQDFEGAM 480
Query: 488 FFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEF 522
VSHDR + + + G++ F G ++
Sbjct: 481 IIVSHDRHLLRLSCSDYYLVDGGEVKSFDGDLDDY 515
Score = 96.3 bits (238), Expect = 3e-24
Identities = 81/296 (27%), Positives = 137/296 (46%), Gaps = 42/296 (14%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
++ ++ +G K + ++ + G R GL+G NG GKST +K+L+ +L+P G
Sbjct: 312 LVKMEQVSVGYGDKAILNHVHLNLVPGARIGLLGRNGAGKSTLIKLLAEQLKPMSGLYEP 371
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
+P + Q Q EF +D + H + L E +R
Sbjct: 372 NPGLNIGYFAQHQL---EFLRLDESPLQH------------LTRLAPNNREQELR----- 411
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
+F G+ G++ L+ P+ G G K R++LA +++ P+++LLD
Sbjct: 412 -DFLGGYGFN-----GDMALS---PVRPFSG-------GEKARLVLALLVWQRPNLLLLD 455
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTN+LD++ L L MII+SHDRH L C+ +D GE++ + G+ D+Y
Sbjct: 456 EPTNHLDLEMRHALTMALQDFEGAMIIVSHDRHLLRLSCSDYYLVDGGEVKSFDGDLDDY 515
Query: 241 ----MTAATQARERLLSDNAKKKAQIAELQ-TFVARFSANASKAKQATSRARQIDK 291
+ AA +A + D+A AQ +LQ A S K+A ++ +I +
Sbjct: 516 HQWLLDAAKEANKPAAQDDA-TPAQDKKLQKRLEAELRQKLSPLKKAQAKLEKIQQ 570
Score = 90.9 bits (224), Expect = 1e-22
Identities = 60/212 (28%), Positives = 102/212 (48%), Gaps = 29/212 (13%)
Query: 344 GERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQD------HAHEFAED 397
G +V ++G NG GK++LL + G L G I AQ+ A E+ D
Sbjct: 27 GHKVGLVGANGTGKSSLLALIMGHLSLDKGEISVPTGWQIATVAQETPALEVSALEYVID 86
Query: 398 -----LNLMEWMGQWRQEGDDEQVV------------------RSFLGRMLFGQDDIKKS 434
L E + + + E + Q+ S L + F + + +
Sbjct: 87 GDREYRELEEALHKAQLEDNGHQIALLHGKIDAIGGYSIRARAASLLAGLGFSEAEQQNP 146
Query: 435 VKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTLFFVSHDR 494
VK SGG + R+ L + ++ + +LLLDEPTNH+D++++ L + ++ Y+GTL +SHDR
Sbjct: 147 VKSFSGGWRMRLNLAQALLCRSELLLLDEPTNHLDLDTMYWLESWIKAYQGTLILISHDR 206
Query: 495 VFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
F+D++ I+ + K+ +KG Y F + R
Sbjct: 207 DFIDAIVDEIVHVEHHKLNYYKGNYTAFERIR 238