Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., ABC transporter, ATP-binding protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  843 bits (2177), Expect = 0.0
 Identities = 414/530 (78%), Positives = 465/530 (87%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           MI+TANIT QFGAKPLFENISVKFG GNRYGLIGANGCGKSTFMKIL G+LEPS GNVS 
Sbjct: 1   MITTANITMQFGAKPLFENISVKFGGGNRYGLIGANGCGKSTFMKILCGDLEPSSGNVSL 60

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
           D NER+ KL+Q+QF YEE+T+IDTVIMGH+ELWKVKQERDRIY+LPEM+EEDG+ VA+LE
Sbjct: 61  DVNERLGKLSQNQFGYEEYTLIDTVIMGHRELWKVKQERDRIYSLPEMSEEDGIAVANLE 120

Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
           +EFAEMDGY AES+AGELLL VGI +E H+GLMS +APG KLRVLLAQ LF+DPD++LLD
Sbjct: 121 MEFAEMDGYTAESRAGELLLGVGIGIESHFGLMSEIAPGLKLRVLLAQALFSDPDVLLLD 180

Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
           EPTNNLDIDTIRWL+D LN R+ TMIIISHDR+FLNSVCTHMADLDYGELR+YPGNYDEY
Sbjct: 181 EPTNNLDIDTIRWLQDVLNQRDSTMIIISHDRYFLNSVCTHMADLDYGELRVYPGNYDEY 240

Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
           M AATQARERLL+DNAKKKAQI+ELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS
Sbjct: 241 MQAATQARERLLADNAKKKAQISELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300

Query: 301 SRQNPFIRFEQSKELFRNALIVENLSQGFDHDLFSNFNAIFEVGERVAIIGENGVGKTTL 360
           SR NPFIRF+Q K+LFRNAL+VENL++G+D  LF + N I EVGER+AI+GENGVGKTTL
Sbjct: 301 SRVNPFIRFDQEKKLFRNALVVENLAKGYDTPLFKDLNLIVEVGERIAILGENGVGKTTL 360

Query: 361 LNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVRSF 420
           L TL   +    G  +WSENSNIGYYAQDH  +F  D+ L EWM QWR+  DD+Q VR  
Sbjct: 361 LRTLIHDIPQDEGHIQWSENSNIGYYAQDHESDFENDMTLFEWMSQWRKPEDDDQAVRGI 420

Query: 421 LGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNAL 480
           LGRMLF  DDIKKSVKVLSGGE+GRML GKL+M KPN+L+LDEPTNHMDMESIESLNNAL
Sbjct: 421 LGRMLFSADDIKKSVKVLSGGEKGRMLFGKLIMQKPNILMLDEPTNHMDMESIESLNNAL 480

Query: 481 EQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSRGVEG 530
           E+Y+GTL FVSHDR FV SLA RI+EI    + DFKGTY EFL S+G+EG
Sbjct: 481 EKYEGTLLFVSHDRAFVSSLANRILEITPNGVNDFKGTYDEFLASKGIEG 530