Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 651 a.a., ABC transporter ATP-binding protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  307 bits (787), Expect = 7e-88
 Identities = 175/538 (32%), Positives = 296/538 (55%), Gaps = 11/538 (2%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           MIS   ++ +F A PLF ++S    + +R  L+G NG GKST +KIL+G   P+ G V+ 
Sbjct: 1   MISVEGLSVEFNATPLFADVSYVINKKDRIALVGKNGAGKSTMLKILAGLQNPTRGVVAV 60

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRI-YALPEMTEEDGMRVADL 119
             +  +  L Q     +  TV++   +  + +++++   +R+   L + T+ +      L
Sbjct: 61  PKDVTIGYLPQVMILSDVRTVMEEAELAFEHIFELQANLERMNQQLADRTDYESEEYHQL 120

Query: 120 EVEFAE-------MDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFA 172
              F         M G   +++    LL +G   E      S  + GW++R+ LA++L  
Sbjct: 121 IDRFTHENDRFLMMGGTNFQAEIERTLLGLGFSREDFNRSTSEFSGGWRMRIELAKLLLR 180

Query: 173 DPDIMLLDEPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRI 232
            PD++LLDEPTN+LDI++I+WLE+ L+ R   ++++SHDR FLN+V T   ++  G++  
Sbjct: 181 RPDVLLLDEPTNHLDIESIQWLENFLSTRANAVVLVSHDRAFLNNVTTRTIEITCGQIYD 240

Query: 233 YPGNYDEYMTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKI 292
           Y   YDE++    + RE+ L     ++ QI + + F+ RF   A+KA Q  SR +Q++KI
Sbjct: 241 YKVKYDEFVVLRKERREQQLRAYENQQKQIQDTEDFIERFRYKATKAVQVQSRIKQLEKI 300

Query: 293 KLDEVKASSRQNPFIRFEQSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIG 351
              EV      +  ++F  +       +I E++ + +  H +F + N     GE+VA +G
Sbjct: 301 DRIEVDEEDNSSLRLKFPPASRSGNYPVICEDVRKAYGQHVVFHDVNLTINRGEKVAFVG 360

Query: 352 ENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEG 411
           +NG GK+TL+  + G ++   G      N  IGY+AQ+ A    E++ + + + +    G
Sbjct: 361 KNGEGKSTLVKCIMGEID-FDGKLTIGHNVQIGYFAQNQAQMLDENMTVFDTIDR-VATG 418

Query: 412 DDEQVVRSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDME 471
           D    +R  LG  +FG +   K VKVLSGGE+ R+ + KL++   N L+LDEPTNH+DM 
Sbjct: 419 DIRLKIRDILGAFMFGGEASDKKVKVLSGGERTRLAMIKLLLEPVNFLILDEPTNHLDMR 478

Query: 472 SIESLNNALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSRGVE 529
           S + L  A+ ++ GT+  VSHDR F+D LAT++ E   G + +  G   +FL+ + ++
Sbjct: 479 SKDVLKEAIREFDGTVILVSHDRDFLDGLATKVYEFGGGTVKEHLGGIYDFLQKKKID 536