Pairwise Alignments
Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Subject, 637 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3
Score = 275 bits (704), Expect = 3e-78
Identities = 172/517 (33%), Positives = 284/517 (54%), Gaps = 19/517 (3%)
Query: 12 GAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNERVAKLNQ 71
G+K L + S+ G++ GL+GANG GKS+ + ++ G L G S ++A + Q
Sbjct: 12 GSKTLLDEASLTIYPGHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSMPSGWQIATVAQ 71
Query: 72 DQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAEMDGYMA 131
+ A E + ++ V+ G KE +++ + ++ E DG +A L + + GY
Sbjct: 72 ETPALE-VSALEYVLDGDKEYRQLEAD---LHIAQE--HNDGHAIATLHGKIDAIGGYAI 125
Query: 132 ESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLDEPTNNLDIDTI 191
++AG LL +G + + S + GW++R+ LAQ L D++LLDEPTN+LD+DT+
Sbjct: 126 RARAGALLAGLGFSEAEQNNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHLDLDTM 185
Query: 192 RWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYD--EYMTAATQARE 249
WLE + + T+I+ISHDR F++ + + ++ +L Y GNY E + A A++
Sbjct: 186 YWLEGWIKSYQGTLILISHDRDFIDEIVDEIVHVENQKLNYYKGNYSAFERIRAERMAQQ 245
Query: 250 RLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKASSRQNPFIRF 309
++ + +K+ A +Q+FV RF ASKAKQA SR + ++ ++ E+ S +PF
Sbjct: 246 QVAYERQQKER--AHMQSFVDRFRYKASKAKQAQSRLKALE--RMTELLPSQADSPFYME 301
Query: 310 EQSKELFRNALI-VENLSQGF-DHDLFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGV 367
+ E N LI +E ++ G+ D + S + G R+ ++G NG GK+TL+ L+G
Sbjct: 302 FRPPEALPNPLIKMEQVAVGYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSGQ 361
Query: 368 LEPRSGMYKWSENSNIGYYAQDHAHEF--AEDLNLMEWMGQWRQEGDDEQVVRSFLGRML 425
L P +G+Y+ + NIGY+AQ H EF +D L + EQ +R+FLG
Sbjct: 362 LSPMTGLYEPNPGLNIGYFAQ-HQIEFLRLDDTPLQHLVR--LAPNAREQELRNFLGGFG 418
Query: 426 FGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKG 485
F D V+ SGGE+ R++L L+ +PN+LLLDEPTNH+D+E +L AL+ ++G
Sbjct: 419 FHGDMALSPVRPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTMALQTFEG 478
Query: 486 TLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEF 522
+ VSHDR + + + G++ F G ++
Sbjct: 479 AMVIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDY 515
Score = 98.6 bits (244), Expect = 6e-25
Identities = 81/308 (26%), Positives = 132/308 (42%), Gaps = 48/308 (15%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
+I + +G K + + + G R GL+G NG GKST +K+LSG+L P G
Sbjct: 312 LIKMEQVAVGYGDKQILSRVHLNLVPGARIGLLGRNGAGKSTLIKLLSGQLSPMTGLYEP 371
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
+P + Q Q EF +D + H + L E +R
Sbjct: 372 NPGLNIGYFAQHQI---EFLRLDDTPLQH------------LVRLAPNAREQELR----- 411
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
F G+ G++ L+ P+ G G K R++LA +++ P+++LLD
Sbjct: 412 -NFLGGFGF-----HGDMALS---PVRPFSG-------GEKARLVLALLVWQRPNLLLLD 455
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTN+LD++ L L M+I+SHDRH L C+ +D G+++ + G+ ++Y
Sbjct: 456 EPTNHLDLEMRHALTMALQTFEGAMVIVSHDRHLLRLTCSDYYLVDQGQVQAFDGDLEDY 515
Query: 241 ------MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKL 294
A A + D+AK + + A S K R+ K++
Sbjct: 516 HQWLLDAAKAASANSTVNGDDAKPAVDKKQQKRLEAELRQKVSPLK------RKQAKLET 569
Query: 295 DEVKASSR 302
D+ K S R
Sbjct: 570 DQQKLSER 577
Score = 92.8 bits (229), Expect = 3e-23
Identities = 59/215 (27%), Positives = 107/215 (49%), Gaps = 35/215 (16%)
Query: 344 GERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEW 403
G +V ++G NG GK++LL + G L G + I AQ+ A +++ +E+
Sbjct: 27 GHKVGLVGANGTGKSSLLALIMGHLSLDKGEFSMPSGWQIATVAQETP---ALEVSALEY 83
Query: 404 M----GQWRQEGDDEQV------------------------VRSFLGRML----FGQDDI 431
+ ++RQ D + +R+ G +L F + +
Sbjct: 84 VLDGDKEYRQLEADLHIAQEHNDGHAIATLHGKIDAIGGYAIRARAGALLAGLGFSEAEQ 143
Query: 432 KKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNALEQYKGTLFFVS 491
VK SGG + R+ L + ++ + ++LLLDEPTNH+D++++ L ++ Y+GTL +S
Sbjct: 144 NNPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHLDLDTMYWLEGWIKSYQGTLILIS 203
Query: 492 HDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
HDR F+D + I+ + + K+ +KG Y+ F + R
Sbjct: 204 HDRDFIDEIVDEIVHVENQKLNYYKGNYSAFERIR 238