Pairwise Alignments
Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056
Subject, 530 a.a., ABC transporter related (RefSeq) from Shewanella sp. ANA-3
Score = 700 bits (1807), Expect = 0.0
Identities = 348/524 (66%), Positives = 414/524 (79%), Gaps = 1/524 (0%)
Query: 1 MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
MISTANIT QFG +PLFENIS KFG GNRYGLIGANGCGKSTFMKILSG L P+ GNVS
Sbjct: 1 MISTANITMQFGPEPLFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSI 60
Query: 61 DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLE 120
P +V L+QDQFA+E++TVID VIMG +LWK+KQERD IYA P+MTEEDGMRV DLE
Sbjct: 61 TPGLKVGTLSQDQFAFEQYTVIDAVIMGDTQLWKIKQERDAIYAKPDMTEEDGMRVGDLE 120
Query: 121 VEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLD 180
EFAEMDGY AES+AGE+L+ GI HYG MS VAPGWKLRVLLAQ LFA+PDI+LLD
Sbjct: 121 SEFAEMDGYSAESRAGEILIEAGIEESFHYGPMSQVAPGWKLRVLLAQALFANPDILLLD 180
Query: 181 EPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEY 240
EPTNNLDI TI WLE LN R CTMIIISHDRHFLN+VCTHMAD+DYGELRIYPGNY+ +
Sbjct: 181 EPTNNLDIHTISWLETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYF 240
Query: 241 MTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLDEVKAS 300
+ + RE+LLS NAKK A+I ELQ FV RF ANASKAK A+SRA+++DKIKLDEVK+S
Sbjct: 241 LEQSALQREQLLSSNAKKSAEIEELQDFVNRFGANASKAKLASSRAKRMDKIKLDEVKSS 300
Query: 301 SRQNPFIRFEQSKELFRNALIVENLSQGFDHD-LFSNFNAIFEVGERVAIIGENGVGKTT 359
SR P IRF K++ R AL++ENL+ GFD + LF + I E G ++AIIGENGVGKTT
Sbjct: 301 SRIAPSIRFAPGKKMHRQALVLENLAHGFDGELLFEGGDLILEAGAKLAIIGENGVGKTT 360
Query: 360 LLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQEGDDEQVVRS 419
LL L L G+ KWSEN++IGY QD +F DL ++EWM QWRQ ++ +VR+
Sbjct: 361 LLRCLVNELIHNQGVIKWSENASIGYCPQDSTSDFDNDLTIIEWMDQWRQPKHNDLMVRA 420
Query: 420 FLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIESLNNA 479
LGR+LF +DD K K SGGE+ R++ GKLMM N++++DEPTNHMDME+IESLNNA
Sbjct: 421 MLGRLLFTEDDANKKAKNCSGGEKNRLIFGKLMMQDINVIIMDEPTNHMDMEAIESLNNA 480
Query: 480 LEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFL 523
L+ ++GTL FVSHDR FV SLATRII+IRD K+ +F+GT+ E+L
Sbjct: 481 LKDFEGTLIFVSHDREFVSSLATRIIDIRDRKLVNFQGTFDEYL 524
Score = 87.0 bits (214), Expect = 2e-21
Identities = 67/234 (28%), Positives = 110/234 (47%), Gaps = 39/234 (16%)
Query: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAH 392
LF N +A F G R +IG NG GK+T + L+G L P SG + +G +QD
Sbjct: 16 LFENISAKFGNGNRYGLIGANGCGKSTFMKILSGALAPTSGNVSITPGLKVGTLSQDQ-F 74
Query: 393 EFAE----DLNLMEWMGQWR--QEGD--------------------------DEQVVRSF 420
F + D +M W+ QE D D S
Sbjct: 75 AFEQYTVIDAVIMGDTQLWKIKQERDAIYAKPDMTEEDGMRVGDLESEFAEMDGYSAESR 134
Query: 421 LGRMLFGQDDIKKS-----VKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIES 475
G +L + I++S + ++ G + R+LL + + P++LLLDEPTN++D+ +I
Sbjct: 135 AGEILI-EAGIEESFHYGPMSQVAPGWKLRVLLAQALFANPDILLLDEPTNNLDIHTISW 193
Query: 476 LNNALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSRGVE 529
L L + K T+ +SHDR F++++ T + +I G++ + G Y FL+ ++
Sbjct: 194 LETELNKRKCTMIIISHDRHFLNAVCTHMADIDYGELRIYPGNYEYFLEQSALQ 247
Score = 82.0 bits (201), Expect = 5e-20
Identities = 60/242 (24%), Positives = 109/242 (45%), Gaps = 35/242 (14%)
Query: 6 NITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSYDPNER 65
N+ F + LFE + G + +IG NG GK+T ++ L EL + G + + N
Sbjct: 324 NLAHGFDGELLFEGGDLILEAGAKLAIIGENGVGKTTLLRCLVNELIHNQGVIKWSENAS 383
Query: 66 VAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQERDRIYALPEMTEEDGMRVADLEVEFAE 125
+ QD + + D I+ + W+ + D + +R + F E
Sbjct: 384 IGYCPQDSTSDFDN---DLTIIEWMDQWRQPKHNDLM-----------VRAMLGRLLFTE 429
Query: 126 MDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPDIMLLDEPTNN 185
D A KA + + G K R++ +++ D +++++DEPTN+
Sbjct: 430 DD---ANKKA------------------KNCSGGEKNRLIFGKLMMQDINVIIMDEPTNH 468
Query: 186 LDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPGNYDEYMTAAT 245
+D++ I L + L T+I +SHDR F++S+ T + D+ +L + G +DEY+
Sbjct: 469 MDMEAIESLNNALKDFEGTLIFVSHDREFVSSLATRIIDIRDRKLVNFQGTFDEYLANLA 528
Query: 246 QA 247
A
Sbjct: 529 SA 530