Pairwise Alignments

Query, 530 a.a., ABC-F family ATPase from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., ABC transporter ATPase component (RefSeq) from Shewanella sp. ANA-3

 Score =  258 bits (659), Expect = 5e-73
 Identities = 162/513 (31%), Positives = 274/513 (53%), Gaps = 18/513 (3%)

Query: 1   MISTANITQQFGAKPLFENISVKFGEGNRYGLIGANGCGKSTFMKILSGELEPSGGNVSY 60
           ++   N +  +G  PL +N       G R  ++G NG GKS+ +KILSG++    G  + 
Sbjct: 3   LVRINNGSLAYGYTPLLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEFNI 62

Query: 61  DPNERVAKLNQDQFAYEEFTVIDTVIMGHKELWKVKQE-----RDRIYALPEMTEEDGMR 115
           D +  V++L QD    E+ +V   +  G KE+ +  ++      D  YA PE+ E    +
Sbjct: 63  DGSVTVSRLQQDPPKAEQGSVYSYIAAGLKEVGEALEQYHQLSHDVAYAEPELMERMLNQ 122

Query: 116 VADLEVEFAEMDGYMAESKAGELLLAVGIPLEQHYGLMSSVAPGWKLRVLLAQILFADPD 175
           +  L+      +G+  +S+  +    +G+  ++    +S ++ GW+ +V LA+ L ++PD
Sbjct: 123 MQKLQETLDHHNGWQLDSRIKQNCELLGLDPDKS---LSELSGGWQRKVALARALVSEPD 179

Query: 176 IMLLDEPTNNLDIDTIRWLEDTLNARNCTMIIISHDRHFLNSVCTHMADLDYGELRIYPG 235
           ++LLDEPTN+LDIDTI WLE  L      ++ ISHDR F+  + T + DLD G +  +PG
Sbjct: 180 LLLLDEPTNHLDIDTIEWLEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPG 239

Query: 236 NYDEYMTAATQARERLLSDNAKKKAQIAELQTFVARFSANASKAKQATSRARQIDKIKLD 295
           NY  Y+    +        NA    ++AE + ++ R    A + +    R R +  ++ +
Sbjct: 240 NYQAYLDGKQEWLRVEAEKNALFDKRLAEEEVWI-RQGVKARRTRN-EGRVRALKALRQE 297

Query: 296 EVKASSRQ-NPFIRFEQSKELFRNALIVENLSQGF-DHDLFSNFNAIFEVGERVAIIGEN 353
             +  +RQ N  +    ++   +    V++L+    D +L  NFN     G+R+A+IG N
Sbjct: 298 RSERLNRQGNAKMAVADTERSGKLVFDVKDLNYNLPDKNLVKNFNTTVLRGDRIALIGPN 357

Query: 354 GVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQDHAHEFAEDLNLMEWMGQWRQ---- 409
           G GK+TL+  L   L+P+SG  K      I Y+ Q +      +  + + +G+ ++    
Sbjct: 358 GCGKSTLIKLLIEKLQPQSGEVKVGTKLEIAYFDQ-YREALDPEQTVEDNVGEGKKTITI 416

Query: 410 EGDDEQVVRSFLGRMLFGQDDIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMD 469
            G D  ++ S+L   LF     +  VK LSGGE+ R+LL KL++   N+++LDEPTN +D
Sbjct: 417 NGQDRHIL-SYLQDFLFSPMRARTPVKALSGGEKNRLLLAKLLIRPANLIILDEPTNDLD 475

Query: 470 MESIESLNNALEQYKGTLFFVSHDRVFVDSLAT 502
           +E++E L + L +Y+GTL  VSHDR F+D+  T
Sbjct: 476 IETLELLESLLTEYQGTLLLVSHDRAFIDNTVT 508



 Score =  102 bits (255), Expect = 3e-26
 Identities = 68/231 (29%), Positives = 114/231 (49%), Gaps = 37/231 (16%)

Query: 333 LFSNFNAIFEVGERVAIIGENGVGKTTLLNTLAGVLEPRSGMYKWSENSNIGYYAQD--- 389
           L  N +   E GERV I+G NG GK++LL  L+G +    G +    +  +    QD   
Sbjct: 18  LLQNADFTIERGERVCIVGRNGAGKSSLLKILSGDVLLDEGEFNIDGSVTVSRLQQDPPK 77

Query: 390 ------HAHEFAEDLNLMEWMGQWRQEGDD-----EQVVRSFLGRMLFGQD--------- 429
                 +++  A    + E + Q+ Q   D      +++   L +M   Q+         
Sbjct: 78  AEQGSVYSYIAAGLKEVGEALEQYHQLSHDVAYAEPELMERMLNQMQKLQETLDHHNGWQ 137

Query: 430 --------------DIKKSVKVLSGGEQGRMLLGKLMMHKPNMLLLDEPTNHMDMESIES 475
                         D  KS+  LSGG Q ++ L + ++ +P++LLLDEPTNH+D+++IE 
Sbjct: 138 LDSRIKQNCELLGLDPDKSLSELSGGWQRKVALARALVSEPDLLLLDEPTNHLDIDTIEW 197

Query: 476 LNNALEQYKGTLFFVSHDRVFVDSLATRIIEIRDGKITDFKGTYAEFLKSR 526
           L   L  ++G + F+SHDR F+  +ATRI+++  G +T + G Y  +L  +
Sbjct: 198 LEKFLLDFQGAIVFISHDRGFIARMATRIVDLDRGVVTSWPGNYQAYLDGK 248