Pairwise Alignments

Query, 221 a.a., DUF3306 domain-containing protein from Vibrio cholerae E7946 ATCC 55056

Subject, 218 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 52.8 bits (125), Expect = 5e-12
 Identities = 52/187 (27%), Positives = 89/187 (47%), Gaps = 21/187 (11%)

Query: 26  NRFFSRWSQRK-LTAESDQLLDTQKSFD------SQPVQEEPI---ESESAV-----ETE 70
           N FFSRWSQR+   A  D+ + TQ + +      ++ V  EP+   ES++++     +  
Sbjct: 9   NGFFSRWSQRREQVAAEDKAVKTQTTAEELTEDKAEEVTLEPVAVQESQASLTQPDEDPN 68

Query: 71  SGLESHSLEQPHSAENEEPSVASLLVSDASQELKKAALRKLFLSGEFSEVCMLDDYNADY 130
             L +  L  P+  E    S A  + ++     K AALR L+    F+E+  L +Y  DY
Sbjct: 69  RILTAEDLPNPNEIEIGG-SFAKFMGANVDPAAKTAALRALWKQPHFNEIDGLLEYALDY 127

Query: 131 SNTATLTTQVAQTLRQWCNELETTPEVKSEQ---AIPEKAM--SDQTMTDLSMPDETTAS 185
           SN   LT +V+  L Q      T    +S++   + PE A+  ++ T+   +   ET  +
Sbjct: 128 SNQPKLTPEVSAELAQKVFRFITKDNEESDEDPTSRPEDAVMSAENTIESKNSDVETQLA 187

Query: 186 APEFAED 192
             + A++
Sbjct: 188 TSQIADN 194